Gene : Carub.0002s2688 C. rubella v1.1
Defline:  (1 of 1) PTHR23198:SF0 - NUCLEAR PORE COMPLEX PROTEIN NUP96 HOMOLOG Genomic Order:  2688
Name:  ? Carub.0002s2688 Secondary Identifier:  ? PAC:39244519
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2688 0.5kb upstream 0.5kb upstream 5528 true scaffold_2: 13781620-13787147 Capsella rubella
Carub.0002s2688 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13786648-13787147 Capsella rubella
Carub.0002s2688 0.5kb downstream 0.5kb downstream 5528 true scaffold_2: 13781120-13786647 Capsella rubella
Carub.0002s2688 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13781120-13781619 Capsella rubella
Carub.0002s2688 1.0kb upstream 1.0kb upstream 6028 true scaffold_2: 13781620-13787647 Capsella rubella
Carub.0002s2688 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13786648-13787647 Capsella rubella
Carub.0002s2688 1.0kb downstream 1.0kb downstream 6028 true scaffold_2: 13780620-13786647 Capsella rubella
Carub.0002s2688 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13780620-13781619 Capsella rubella
Carub.0002s2688 2.0kb upstream 2.0kb upstream 7028 true scaffold_2: 13781620-13788647 Capsella rubella
Carub.0002s2688 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13786648-13788647 Capsella rubella
Carub.0002s2688 2.0kb downstream 2.0kb downstream 7028 true scaffold_2: 13779620-13786647 Capsella rubella
Carub.0002s2688 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13779620-13781619 Capsella rubella
Carub.0002s2688 5.0kb upstream 5.0kb upstream 10028 true scaffold_2: 13781620-13791647 Capsella rubella
Carub.0002s2688 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13786648-13791647 Capsella rubella
Carub.0002s2688 5.0kb downstream 5.0kb downstream 10028 true scaffold_2: 13776620-13786647 Capsella rubella
Carub.0002s2688 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13776620-13781619 Capsella rubella
Carub.0002s2688 10.0kb upstream 10.0kb upstream 15028 true scaffold_2: 13781620-13796647 Capsella rubella
Carub.0002s2688 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13786648-13796647 Capsella rubella
Carub.0002s2688 10.0kb downstream 10.0kb downstream 15028 true scaffold_2: 13771620-13786647 Capsella rubella
Carub.0002s2688 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13771620-13781619 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360570 5261 Brassicaceae View MSA
123833721 5264 Brassicales-Malvales View MSA
124337960 5266 SBM View MSA
124238103 5268 Malvidae View MSA
124062118 5270 Rosid View MSA
123738828 5271 Pentapetalae View MSA
122786921 5272 Eudicot View MSA
122043247 5273 Angiosperm View MSA
121310093 5274 Embryophyte View MSA
123347679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain