Gene : Carub.0002s2715 C. rubella v1.1
Defline:  (1 of 1) K10803 - DNA-repair protein XRCC1 (XRCC1) Genomic Order:  2715
Name:  ? Carub.0002s2715 Secondary Identifier:  ? PAC:39244674
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2715 0.5kb upstream 0.5kb upstream 3051 true scaffold_2: 13880159-13883209 Capsella rubella
Carub.0002s2715 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13880159-13880658 Capsella rubella
Carub.0002s2715 0.5kb downstream 0.5kb downstream 3051 true scaffold_2: 13880659-13883709 Capsella rubella
Carub.0002s2715 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13883210-13883709 Capsella rubella
Carub.0002s2715 1.0kb upstream 1.0kb upstream 3551 true scaffold_2: 13879659-13883209 Capsella rubella
Carub.0002s2715 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13879659-13880658 Capsella rubella
Carub.0002s2715 1.0kb downstream 1.0kb downstream 3551 true scaffold_2: 13880659-13884209 Capsella rubella
Carub.0002s2715 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13883210-13884209 Capsella rubella
Carub.0002s2715 2.0kb upstream 2.0kb upstream 4551 true scaffold_2: 13878659-13883209 Capsella rubella
Carub.0002s2715 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13878659-13880658 Capsella rubella
Carub.0002s2715 2.0kb downstream 2.0kb downstream 4551 true scaffold_2: 13880659-13885209 Capsella rubella
Carub.0002s2715 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13883210-13885209 Capsella rubella
Carub.0002s2715 5.0kb upstream 5.0kb upstream 7551 true scaffold_2: 13875659-13883209 Capsella rubella
Carub.0002s2715 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13875659-13880658 Capsella rubella
Carub.0002s2715 5.0kb downstream 5.0kb downstream 7551 true scaffold_2: 13880659-13888209 Capsella rubella
Carub.0002s2715 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13883210-13888209 Capsella rubella
Carub.0002s2715 10.0kb upstream 10.0kb upstream 12551 true scaffold_2: 13870659-13883209 Capsella rubella
Carub.0002s2715 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13870659-13880658 Capsella rubella
Carub.0002s2715 10.0kb downstream 10.0kb downstream 12551 true scaffold_2: 13880659-13893209 Capsella rubella
Carub.0002s2715 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13883210-13893209 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374644 5261 Brassicaceae View MSA
123834439 5264 Brassicales-Malvales View MSA
124342643 5266 SBM View MSA
124244372 5268 Malvidae View MSA
124064277 5270 Rosid View MSA
123745081 5271 Pentapetalae View MSA
122790473 5272 Eudicot View MSA
122046298 5273 Angiosperm View MSA
121347821 5274 Embryophyte View MSA
123380641 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain