Gene : Carub.0002s2471 C. rubella v1.1
Defline:  (1 of 2) PTHR11214//PTHR11214:SF74 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE // BETA-1,3-GALACTOSYLTRANSFERASE 7-RELATED Genomic Order:  2471
Name:  ? Carub.0002s2471 Secondary Identifier:  ? PAC:39244060
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2471 0.5kb upstream 0.5kb upstream 3093 true scaffold_2: 12923637-12926729 Capsella rubella
Carub.0002s2471 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12926230-12926729 Capsella rubella
Carub.0002s2471 0.5kb downstream 0.5kb downstream 3093 true scaffold_2: 12923137-12926229 Capsella rubella
Carub.0002s2471 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12923137-12923636 Capsella rubella
Carub.0002s2471 1.0kb upstream 1.0kb upstream 3593 true scaffold_2: 12923637-12927229 Capsella rubella
Carub.0002s2471 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12926230-12927229 Capsella rubella
Carub.0002s2471 1.0kb downstream 1.0kb downstream 3593 true scaffold_2: 12922637-12926229 Capsella rubella
Carub.0002s2471 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12922637-12923636 Capsella rubella
Carub.0002s2471 2.0kb upstream 2.0kb upstream 4593 true scaffold_2: 12923637-12928229 Capsella rubella
Carub.0002s2471 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12926230-12928229 Capsella rubella
Carub.0002s2471 2.0kb downstream 2.0kb downstream 4593 true scaffold_2: 12921637-12926229 Capsella rubella
Carub.0002s2471 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12921637-12923636 Capsella rubella
Carub.0002s2471 5.0kb upstream 5.0kb upstream 7593 true scaffold_2: 12923637-12931229 Capsella rubella
Carub.0002s2471 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12926230-12931229 Capsella rubella
Carub.0002s2471 5.0kb downstream 5.0kb downstream 7593 true scaffold_2: 12918637-12926229 Capsella rubella
Carub.0002s2471 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12918637-12923636 Capsella rubella
Carub.0002s2471 10.0kb upstream 10.0kb upstream 12593 true scaffold_2: 12923637-12936229 Capsella rubella
Carub.0002s2471 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12926230-12936229 Capsella rubella
Carub.0002s2471 10.0kb downstream 10.0kb downstream 12593 true scaffold_2: 12913637-12926229 Capsella rubella
Carub.0002s2471 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12913637-12923636 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362724 5261 Brassicaceae View MSA
123838052 5264 Brassicales-Malvales View MSA
124344083 5266 SBM View MSA
124237796 5268 Malvidae View MSA
124069367 5270 Rosid View MSA
123739102 5271 Pentapetalae View MSA
122792483 5272 Eudicot View MSA
122048102 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain