Gene : Carub.0002s2228 C. rubella v1.1
Defline:  (1 of 4) PTHR11850//PTHR11850:SF111 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // BEL1-LIKE HOMEODOMAIN PROTEIN 1-RELATED Genomic Order:  2228
Name:  ? Carub.0002s2228 Secondary Identifier:  ? PAC:39243174
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2228 0.5kb upstream 0.5kb upstream 3378 true scaffold_2: 11920720-11924097 Capsella rubella
Carub.0002s2228 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11923598-11924097 Capsella rubella
Carub.0002s2228 0.5kb downstream 0.5kb downstream 3378 true scaffold_2: 11920220-11923597 Capsella rubella
Carub.0002s2228 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11920220-11920719 Capsella rubella
Carub.0002s2228 1.0kb upstream 1.0kb upstream 3878 true scaffold_2: 11920720-11924597 Capsella rubella
Carub.0002s2228 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11923598-11924597 Capsella rubella
Carub.0002s2228 1.0kb downstream 1.0kb downstream 3878 true scaffold_2: 11919720-11923597 Capsella rubella
Carub.0002s2228 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11919720-11920719 Capsella rubella
Carub.0002s2228 2.0kb upstream 2.0kb upstream 4878 true scaffold_2: 11920720-11925597 Capsella rubella
Carub.0002s2228 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11923598-11925597 Capsella rubella
Carub.0002s2228 2.0kb downstream 2.0kb downstream 4878 true scaffold_2: 11918720-11923597 Capsella rubella
Carub.0002s2228 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11918720-11920719 Capsella rubella
Carub.0002s2228 5.0kb upstream 5.0kb upstream 7878 true scaffold_2: 11920720-11928597 Capsella rubella
Carub.0002s2228 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11923598-11928597 Capsella rubella
Carub.0002s2228 5.0kb downstream 5.0kb downstream 7878 true scaffold_2: 11915720-11923597 Capsella rubella
Carub.0002s2228 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11915720-11920719 Capsella rubella
Carub.0002s2228 10.0kb upstream 10.0kb upstream 12878 true scaffold_2: 11920720-11933597 Capsella rubella
Carub.0002s2228 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11923598-11933597 Capsella rubella
Carub.0002s2228 10.0kb downstream 10.0kb downstream 12878 true scaffold_2: 11910720-11923597 Capsella rubella
Carub.0002s2228 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11910720-11920719 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373658 5261 Brassicaceae View MSA
123836772 5264 Brassicales-Malvales View MSA
124340085 5266 SBM View MSA
124245749 5268 Malvidae View MSA
124069804 5270 Rosid View MSA
123753469 5271 Pentapetalae View MSA
122794257 5272 Eudicot View MSA
122051501 5273 Angiosperm View MSA
121350603 5274 Embryophyte View MSA
123426094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain