Gene : Carub.0002s2399 C. rubella v1.1
Defline:  (1 of 1) PTHR31752//PTHR31752:SF8 - FAMILY NOT NAMED // AUXIN EFFLUX CARRIER COMPONENT 6-RELATED Genomic Order:  2399
Name:  ? Carub.0002s2399 Secondary Identifier:  ? PAC:39244072
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2399 0.5kb upstream 0.5kb upstream 4274 true scaffold_2: 12614870-12619143 Capsella rubella
Carub.0002s2399 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12614870-12615369 Capsella rubella
Carub.0002s2399 0.5kb downstream 0.5kb downstream 4274 true scaffold_2: 12615370-12619643 Capsella rubella
Carub.0002s2399 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12619144-12619643 Capsella rubella
Carub.0002s2399 1.0kb upstream 1.0kb upstream 4774 true scaffold_2: 12614370-12619143 Capsella rubella
Carub.0002s2399 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12614370-12615369 Capsella rubella
Carub.0002s2399 1.0kb downstream 1.0kb downstream 4774 true scaffold_2: 12615370-12620143 Capsella rubella
Carub.0002s2399 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12619144-12620143 Capsella rubella
Carub.0002s2399 2.0kb upstream 2.0kb upstream 5774 true scaffold_2: 12613370-12619143 Capsella rubella
Carub.0002s2399 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12613370-12615369 Capsella rubella
Carub.0002s2399 2.0kb downstream 2.0kb downstream 5774 true scaffold_2: 12615370-12621143 Capsella rubella
Carub.0002s2399 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12619144-12621143 Capsella rubella
Carub.0002s2399 5.0kb upstream 5.0kb upstream 8774 true scaffold_2: 12610370-12619143 Capsella rubella
Carub.0002s2399 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12610370-12615369 Capsella rubella
Carub.0002s2399 5.0kb downstream 5.0kb downstream 8774 true scaffold_2: 12615370-12624143 Capsella rubella
Carub.0002s2399 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12619144-12624143 Capsella rubella
Carub.0002s2399 10.0kb upstream 10.0kb upstream 13774 true scaffold_2: 12605370-12619143 Capsella rubella
Carub.0002s2399 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12605370-12615369 Capsella rubella
Carub.0002s2399 10.0kb downstream 10.0kb downstream 13774 true scaffold_2: 12615370-12629143 Capsella rubella
Carub.0002s2399 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12619144-12629143 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372918 5261 Brassicaceae View MSA
123830142 5264 Brassicales-Malvales View MSA
124349829 5266 SBM View MSA
124250518 5268 Malvidae View MSA
124067962 5270 Rosid View MSA
123747841 5271 Pentapetalae View MSA
122796951 5272 Eudicot View MSA
122046141 5273 Angiosperm View MSA
121351759 5274 Embryophyte View MSA
123382310 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain