Gene : Carub.0002s2446 C. rubella v1.1
Defline:  (1 of 30) PTHR10015 - HEAT SHOCK TRANSCRIPTION FACTOR Genomic Order:  2446
Name:  ? Carub.0002s2446 Secondary Identifier:  ? PAC:39244291
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2446 0.5kb upstream 0.5kb upstream 905 true scaffold_2: 12801728-12802632 Capsella rubella
Carub.0002s2446 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12801728-12802227 Capsella rubella
Carub.0002s2446 0.5kb downstream 0.5kb downstream 905 true scaffold_2: 12802228-12803132 Capsella rubella
Carub.0002s2446 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12802633-12803132 Capsella rubella
Carub.0002s2446 1.0kb upstream 1.0kb upstream 1405 true scaffold_2: 12801228-12802632 Capsella rubella
Carub.0002s2446 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12801228-12802227 Capsella rubella
Carub.0002s2446 1.0kb downstream 1.0kb downstream 1405 true scaffold_2: 12802228-12803632 Capsella rubella
Carub.0002s2446 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12802633-12803632 Capsella rubella
Carub.0002s2446 2.0kb upstream 2.0kb upstream 2405 true scaffold_2: 12800228-12802632 Capsella rubella
Carub.0002s2446 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12800228-12802227 Capsella rubella
Carub.0002s2446 2.0kb downstream 2.0kb downstream 2405 true scaffold_2: 12802228-12804632 Capsella rubella
Carub.0002s2446 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12802633-12804632 Capsella rubella
Carub.0002s2446 5.0kb upstream 5.0kb upstream 5405 true scaffold_2: 12797228-12802632 Capsella rubella
Carub.0002s2446 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12797228-12802227 Capsella rubella
Carub.0002s2446 5.0kb downstream 5.0kb downstream 5405 true scaffold_2: 12802228-12807632 Capsella rubella
Carub.0002s2446 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12802633-12807632 Capsella rubella
Carub.0002s2446 10.0kb upstream 10.0kb upstream 10405 true scaffold_2: 12792228-12802632 Capsella rubella
Carub.0002s2446 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12792228-12802227 Capsella rubella
Carub.0002s2446 10.0kb downstream 10.0kb downstream 10405 true scaffold_2: 12802228-12812632 Capsella rubella
Carub.0002s2446 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12802633-12812632 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380981 5261 Brassicaceae View MSA
123802997 5264 Brassicales-Malvales View MSA
124300140 5266 SBM View MSA
124151394 5268 Malvidae View MSA
124074457 5270 Rosid View MSA
123749561 5271 Pentapetalae View MSA
122794562 5272 Eudicot View MSA
122050286 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain