Gene : Carub.0002s2452 C. rubella v1.1
Defline:  (1 of 3) PTHR33734:SF3 - LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 Genomic Order:  2452
Name:  ? Carub.0002s2452 Secondary Identifier:  ? PAC:39244773
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2452 0.5kb upstream 0.5kb upstream 2559 true scaffold_2: 12832977-12835535 Capsella rubella
Carub.0002s2452 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12832977-12833476 Capsella rubella
Carub.0002s2452 0.5kb downstream 0.5kb downstream 2559 true scaffold_2: 12833477-12836035 Capsella rubella
Carub.0002s2452 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12835536-12836035 Capsella rubella
Carub.0002s2452 1.0kb upstream 1.0kb upstream 3059 true scaffold_2: 12832477-12835535 Capsella rubella
Carub.0002s2452 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12832477-12833476 Capsella rubella
Carub.0002s2452 1.0kb downstream 1.0kb downstream 3059 true scaffold_2: 12833477-12836535 Capsella rubella
Carub.0002s2452 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12835536-12836535 Capsella rubella
Carub.0002s2452 2.0kb upstream 2.0kb upstream 4059 true scaffold_2: 12831477-12835535 Capsella rubella
Carub.0002s2452 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12831477-12833476 Capsella rubella
Carub.0002s2452 2.0kb downstream 2.0kb downstream 4059 true scaffold_2: 12833477-12837535 Capsella rubella
Carub.0002s2452 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12835536-12837535 Capsella rubella
Carub.0002s2452 5.0kb upstream 5.0kb upstream 7059 true scaffold_2: 12828477-12835535 Capsella rubella
Carub.0002s2452 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12828477-12833476 Capsella rubella
Carub.0002s2452 5.0kb downstream 5.0kb downstream 7059 true scaffold_2: 12833477-12840535 Capsella rubella
Carub.0002s2452 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12835536-12840535 Capsella rubella
Carub.0002s2452 10.0kb upstream 10.0kb upstream 12059 true scaffold_2: 12823477-12835535 Capsella rubella
Carub.0002s2452 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12823477-12833476 Capsella rubella
Carub.0002s2452 10.0kb downstream 10.0kb downstream 12059 true scaffold_2: 12833477-12845535 Capsella rubella
Carub.0002s2452 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12835536-12845535 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510620 5273 Angiosperm View MSA
122366204 5261 Brassicaceae View MSA
123799127 5264 Brassicales-Malvales View MSA
124296678 5266 SBM View MSA
124148760 5268 Malvidae View MSA
123874696 5270 Rosid View MSA
123458628 5271 Pentapetalae View MSA
122494030 5272 Eudicot View MSA
121350976 5274 Embryophyte View MSA
123381953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain