Gene : Carub.0002s2101 C. rubella v1.1
Defline:  (1 of 5) PTHR33673//PTHR33673:SF1 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 5, TAC CLONE:K3K3 Genomic Order:  2101
Name:  ? Carub.0002s2101 Secondary Identifier:  ? PAC:39245103
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2101 0.5kb upstream 0.5kb upstream 1565 true scaffold_2: 11489862-11491426 Capsella rubella
Carub.0002s2101 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11490927-11491426 Capsella rubella
Carub.0002s2101 0.5kb downstream 0.5kb downstream 1565 true scaffold_2: 11489362-11490926 Capsella rubella
Carub.0002s2101 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11489362-11489861 Capsella rubella
Carub.0002s2101 1.0kb upstream 1.0kb upstream 2065 true scaffold_2: 11489862-11491926 Capsella rubella
Carub.0002s2101 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11490927-11491926 Capsella rubella
Carub.0002s2101 1.0kb downstream 1.0kb downstream 2065 true scaffold_2: 11488862-11490926 Capsella rubella
Carub.0002s2101 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11488862-11489861 Capsella rubella
Carub.0002s2101 2.0kb upstream 2.0kb upstream 3065 true scaffold_2: 11489862-11492926 Capsella rubella
Carub.0002s2101 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11490927-11492926 Capsella rubella
Carub.0002s2101 2.0kb downstream 2.0kb downstream 3065 true scaffold_2: 11487862-11490926 Capsella rubella
Carub.0002s2101 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11487862-11489861 Capsella rubella
Carub.0002s2101 5.0kb upstream 5.0kb upstream 6065 true scaffold_2: 11489862-11495926 Capsella rubella
Carub.0002s2101 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11490927-11495926 Capsella rubella
Carub.0002s2101 5.0kb downstream 5.0kb downstream 6065 true scaffold_2: 11484862-11490926 Capsella rubella
Carub.0002s2101 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11484862-11489861 Capsella rubella
Carub.0002s2101 10.0kb upstream 10.0kb upstream 11065 true scaffold_2: 11489862-11500926 Capsella rubella
Carub.0002s2101 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11490927-11500926 Capsella rubella
Carub.0002s2101 10.0kb downstream 10.0kb downstream 11065 true scaffold_2: 11479862-11490926 Capsella rubella
Carub.0002s2101 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11479862-11489861 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380797 5261 Brassicaceae View MSA
123836282 5264 Brassicales-Malvales View MSA
124336487 5266 SBM View MSA
124253062 5268 Malvidae View MSA
124071200 5270 Rosid View MSA
123751768 5271 Pentapetalae View MSA
122796743 5272 Eudicot View MSA
122047095 5273 Angiosperm View MSA
121310690 5274 Embryophyte View MSA
123348114 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain