Gene : Carub.0002s2112 C. rubella v1.1
Defline:  (1 of 1) K09658 - dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (DPM2) Genomic Order:  2112
Name:  ? Carub.0002s2112 Secondary Identifier:  ? PAC:39243906
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2112 0.5kb upstream 0.5kb upstream 4093 true scaffold_2: 11524186-11528278 Capsella rubella
Carub.0002s2112 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11527779-11528278 Capsella rubella
Carub.0002s2112 0.5kb downstream 0.5kb downstream 4093 true scaffold_2: 11523686-11527778 Capsella rubella
Carub.0002s2112 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11523686-11524185 Capsella rubella
Carub.0002s2112 1.0kb upstream 1.0kb upstream 4593 true scaffold_2: 11524186-11528778 Capsella rubella
Carub.0002s2112 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11527779-11528778 Capsella rubella
Carub.0002s2112 1.0kb downstream 1.0kb downstream 4593 true scaffold_2: 11523186-11527778 Capsella rubella
Carub.0002s2112 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11523186-11524185 Capsella rubella
Carub.0002s2112 2.0kb upstream 2.0kb upstream 5593 true scaffold_2: 11524186-11529778 Capsella rubella
Carub.0002s2112 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11527779-11529778 Capsella rubella
Carub.0002s2112 2.0kb downstream 2.0kb downstream 5593 true scaffold_2: 11522186-11527778 Capsella rubella
Carub.0002s2112 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11522186-11524185 Capsella rubella
Carub.0002s2112 5.0kb upstream 5.0kb upstream 8593 true scaffold_2: 11524186-11532778 Capsella rubella
Carub.0002s2112 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11527779-11532778 Capsella rubella
Carub.0002s2112 5.0kb downstream 5.0kb downstream 8593 true scaffold_2: 11519186-11527778 Capsella rubella
Carub.0002s2112 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11519186-11524185 Capsella rubella
Carub.0002s2112 10.0kb upstream 10.0kb upstream 13593 true scaffold_2: 11524186-11537778 Capsella rubella
Carub.0002s2112 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11527779-11537778 Capsella rubella
Carub.0002s2112 10.0kb downstream 10.0kb downstream 13593 true scaffold_2: 11514186-11527778 Capsella rubella
Carub.0002s2112 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11514186-11524185 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378968 5261 Brassicaceae View MSA
123840858 5264 Brassicales-Malvales View MSA
124347003 5266 SBM View MSA
124245630 5268 Malvidae View MSA
124071671 5270 Rosid View MSA
123741974 5271 Pentapetalae View MSA
122794154 5272 Eudicot View MSA
122048718 5273 Angiosperm View MSA
121349039 5274 Embryophyte View MSA
123381135 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain