Gene : Carub.0002s2110 C. rubella v1.1
Defline:  (1 of 1) PTHR22603:SF41 - CHOLINE KINASE 2-RELATED Genomic Order:  2110
Name:  ? Carub.0002s2110 Secondary Identifier:  ? PAC:39244187
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-3385 Capsella rubella pathologic  
Crubella PWY4FS-6 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2110 0.5kb upstream 0.5kb upstream 2952 true scaffold_2: 11515739-11518690 Capsella rubella
Carub.0002s2110 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11515739-11516238 Capsella rubella
Carub.0002s2110 0.5kb downstream 0.5kb downstream 2952 true scaffold_2: 11516239-11519190 Capsella rubella
Carub.0002s2110 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11518691-11519190 Capsella rubella
Carub.0002s2110 1.0kb upstream 1.0kb upstream 3452 true scaffold_2: 11515239-11518690 Capsella rubella
Carub.0002s2110 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11515239-11516238 Capsella rubella
Carub.0002s2110 1.0kb downstream 1.0kb downstream 3452 true scaffold_2: 11516239-11519690 Capsella rubella
Carub.0002s2110 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11518691-11519690 Capsella rubella
Carub.0002s2110 2.0kb upstream 2.0kb upstream 4452 true scaffold_2: 11514239-11518690 Capsella rubella
Carub.0002s2110 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11514239-11516238 Capsella rubella
Carub.0002s2110 2.0kb downstream 2.0kb downstream 4452 true scaffold_2: 11516239-11520690 Capsella rubella
Carub.0002s2110 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11518691-11520690 Capsella rubella
Carub.0002s2110 5.0kb upstream 5.0kb upstream 7452 true scaffold_2: 11511239-11518690 Capsella rubella
Carub.0002s2110 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11511239-11516238 Capsella rubella
Carub.0002s2110 5.0kb downstream 5.0kb downstream 7452 true scaffold_2: 11516239-11523690 Capsella rubella
Carub.0002s2110 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11518691-11523690 Capsella rubella
Carub.0002s2110 10.0kb upstream 10.0kb upstream 12452 true scaffold_2: 11506239-11518690 Capsella rubella
Carub.0002s2110 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11506239-11516238 Capsella rubella
Carub.0002s2110 10.0kb downstream 10.0kb downstream 12452 true scaffold_2: 11516239-11528690 Capsella rubella
Carub.0002s2110 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11518691-11528690 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373896 5261 Brassicaceae View MSA
123830866 5264 Brassicales-Malvales View MSA
124346062 5266 SBM View MSA
124248672 5268 Malvidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain