Gene : Carub.0002s2126 C. rubella v1.1
Defline:  (1 of 1) PTHR22835//PTHR22835:SF267 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2126
Name:  ? Carub.0002s2126 Secondary Identifier:  ? PAC:39243711
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella LIPAS-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2126 0.5kb upstream 0.5kb upstream 2282 true scaffold_2: 11568251-11570532 Capsella rubella
Carub.0002s2126 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11570033-11570532 Capsella rubella
Carub.0002s2126 0.5kb downstream 0.5kb downstream 2282 true scaffold_2: 11567751-11570032 Capsella rubella
Carub.0002s2126 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11567751-11568250 Capsella rubella
Carub.0002s2126 1.0kb upstream 1.0kb upstream 2782 true scaffold_2: 11568251-11571032 Capsella rubella
Carub.0002s2126 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11570033-11571032 Capsella rubella
Carub.0002s2126 1.0kb downstream 1.0kb downstream 2782 true scaffold_2: 11567251-11570032 Capsella rubella
Carub.0002s2126 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11567251-11568250 Capsella rubella
Carub.0002s2126 2.0kb upstream 2.0kb upstream 3782 true scaffold_2: 11568251-11572032 Capsella rubella
Carub.0002s2126 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11570033-11572032 Capsella rubella
Carub.0002s2126 2.0kb downstream 2.0kb downstream 3782 true scaffold_2: 11566251-11570032 Capsella rubella
Carub.0002s2126 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11566251-11568250 Capsella rubella
Carub.0002s2126 5.0kb upstream 5.0kb upstream 6782 true scaffold_2: 11568251-11575032 Capsella rubella
Carub.0002s2126 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11570033-11575032 Capsella rubella
Carub.0002s2126 5.0kb downstream 5.0kb downstream 6782 true scaffold_2: 11563251-11570032 Capsella rubella
Carub.0002s2126 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11563251-11568250 Capsella rubella
Carub.0002s2126 10.0kb upstream 10.0kb upstream 11782 true scaffold_2: 11568251-11580032 Capsella rubella
Carub.0002s2126 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11570033-11580032 Capsella rubella
Carub.0002s2126 10.0kb downstream 10.0kb downstream 11782 true scaffold_2: 11558251-11570032 Capsella rubella
Carub.0002s2126 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11558251-11568250 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372713 5261 Brassicaceae View MSA
123830982 5264 Brassicales-Malvales View MSA
124345476 5266 SBM View MSA
124253733 5268 Malvidae View MSA
124065806 5270 Rosid View MSA
123747165 5271 Pentapetalae View MSA
122791413 5272 Eudicot View MSA
122042370 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain