Gene : Carub.0002s2152 C. rubella v1.1
Defline:  (1 of 2) PF06549 - Protein of unknown function (DUF1118) (DUF1118) Genomic Order:  2152
Name:  ? Carub.0002s2152 Secondary Identifier:  ? PAC:39244078
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2152 0.5kb upstream 0.5kb upstream 1616 true scaffold_2: 11662450-11664065 Capsella rubella
Carub.0002s2152 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11662450-11662949 Capsella rubella
Carub.0002s2152 0.5kb downstream 0.5kb downstream 1616 true scaffold_2: 11662950-11664565 Capsella rubella
Carub.0002s2152 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11664066-11664565 Capsella rubella
Carub.0002s2152 1.0kb upstream 1.0kb upstream 2116 true scaffold_2: 11661950-11664065 Capsella rubella
Carub.0002s2152 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11661950-11662949 Capsella rubella
Carub.0002s2152 1.0kb downstream 1.0kb downstream 2116 true scaffold_2: 11662950-11665065 Capsella rubella
Carub.0002s2152 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11664066-11665065 Capsella rubella
Carub.0002s2152 2.0kb upstream 2.0kb upstream 3116 true scaffold_2: 11660950-11664065 Capsella rubella
Carub.0002s2152 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11660950-11662949 Capsella rubella
Carub.0002s2152 2.0kb downstream 2.0kb downstream 3116 true scaffold_2: 11662950-11666065 Capsella rubella
Carub.0002s2152 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11664066-11666065 Capsella rubella
Carub.0002s2152 5.0kb upstream 5.0kb upstream 6116 true scaffold_2: 11657950-11664065 Capsella rubella
Carub.0002s2152 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11657950-11662949 Capsella rubella
Carub.0002s2152 5.0kb downstream 5.0kb downstream 6116 true scaffold_2: 11662950-11669065 Capsella rubella
Carub.0002s2152 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11664066-11669065 Capsella rubella
Carub.0002s2152 10.0kb upstream 10.0kb upstream 11116 true scaffold_2: 11652950-11664065 Capsella rubella
Carub.0002s2152 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11652950-11662949 Capsella rubella
Carub.0002s2152 10.0kb downstream 10.0kb downstream 11116 true scaffold_2: 11662950-11674065 Capsella rubella
Carub.0002s2152 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11664066-11674065 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360296 5261 Brassicaceae View MSA
123831705 5264 Brassicales-Malvales View MSA
124343755 5266 SBM View MSA
124244367 5268 Malvidae View MSA
124062610 5270 Rosid View MSA
123738442 5271 Pentapetalae View MSA
122792946 5272 Eudicot View MSA
122042149 5273 Angiosperm View MSA
121345694 5274 Embryophyte View MSA
123424116 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain