Gene : Carub.0002s2158 C. rubella v1.1
Defline:  (1 of 2) PTHR11214//PTHR11214:SF119 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE // BETA-1,3-GALACTOSYLTRANSFERASE 18-RELATED Genomic Order:  2158
Name:  ? Carub.0002s2158 Secondary Identifier:  ? PAC:39245425
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2158 0.5kb upstream 0.5kb upstream 3608 true scaffold_2: 11686770-11690377 Capsella rubella
Carub.0002s2158 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11689878-11690377 Capsella rubella
Carub.0002s2158 0.5kb downstream 0.5kb downstream 3608 true scaffold_2: 11686270-11689877 Capsella rubella
Carub.0002s2158 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11686270-11686769 Capsella rubella
Carub.0002s2158 1.0kb upstream 1.0kb upstream 4108 true scaffold_2: 11686770-11690877 Capsella rubella
Carub.0002s2158 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11689878-11690877 Capsella rubella
Carub.0002s2158 1.0kb downstream 1.0kb downstream 4108 true scaffold_2: 11685770-11689877 Capsella rubella
Carub.0002s2158 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11685770-11686769 Capsella rubella
Carub.0002s2158 2.0kb upstream 2.0kb upstream 5108 true scaffold_2: 11686770-11691877 Capsella rubella
Carub.0002s2158 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11689878-11691877 Capsella rubella
Carub.0002s2158 2.0kb downstream 2.0kb downstream 5108 true scaffold_2: 11684770-11689877 Capsella rubella
Carub.0002s2158 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11684770-11686769 Capsella rubella
Carub.0002s2158 5.0kb upstream 5.0kb upstream 8108 true scaffold_2: 11686770-11694877 Capsella rubella
Carub.0002s2158 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11689878-11694877 Capsella rubella
Carub.0002s2158 5.0kb downstream 5.0kb downstream 8108 true scaffold_2: 11681770-11689877 Capsella rubella
Carub.0002s2158 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11681770-11686769 Capsella rubella
Carub.0002s2158 10.0kb upstream 10.0kb upstream 13108 true scaffold_2: 11686770-11699877 Capsella rubella
Carub.0002s2158 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11689878-11699877 Capsella rubella
Carub.0002s2158 10.0kb downstream 10.0kb downstream 13108 true scaffold_2: 11676770-11689877 Capsella rubella
Carub.0002s2158 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11676770-11686769 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373686 5261 Brassicaceae View MSA
123800600 5264 Brassicales-Malvales View MSA
124297998 5266 SBM View MSA
124149748 5268 Malvidae View MSA
124070105 5270 Rosid View MSA
123744575 5271 Pentapetalae View MSA
122795543 5272 Eudicot View MSA
122042506 5273 Angiosperm View MSA
121350326 5274 Embryophyte View MSA
123381679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain