Gene : Carub.0002s2167 C. rubella v1.1
Defline:  (1 of 1) PF11910 - Cyanobacterial and plant NDH-1 subunit O (NdhO) Genomic Order:  2167
Name:  ? Carub.0002s2167 Secondary Identifier:  ? PAC:39244317
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2167 0.5kb upstream 0.5kb upstream 1682 true scaffold_2: 11717759-11719440 Capsella rubella
Carub.0002s2167 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11718941-11719440 Capsella rubella
Carub.0002s2167 0.5kb downstream 0.5kb downstream 1682 true scaffold_2: 11717259-11718940 Capsella rubella
Carub.0002s2167 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11717259-11717758 Capsella rubella
Carub.0002s2167 1.0kb upstream 1.0kb upstream 2182 true scaffold_2: 11717759-11719940 Capsella rubella
Carub.0002s2167 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11718941-11719940 Capsella rubella
Carub.0002s2167 1.0kb downstream 1.0kb downstream 2182 true scaffold_2: 11716759-11718940 Capsella rubella
Carub.0002s2167 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11716759-11717758 Capsella rubella
Carub.0002s2167 2.0kb upstream 2.0kb upstream 3182 true scaffold_2: 11717759-11720940 Capsella rubella
Carub.0002s2167 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11718941-11720940 Capsella rubella
Carub.0002s2167 2.0kb downstream 2.0kb downstream 3182 true scaffold_2: 11715759-11718940 Capsella rubella
Carub.0002s2167 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11715759-11717758 Capsella rubella
Carub.0002s2167 5.0kb upstream 5.0kb upstream 6182 true scaffold_2: 11717759-11723940 Capsella rubella
Carub.0002s2167 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11718941-11723940 Capsella rubella
Carub.0002s2167 5.0kb downstream 5.0kb downstream 6182 true scaffold_2: 11712759-11718940 Capsella rubella
Carub.0002s2167 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11712759-11717758 Capsella rubella
Carub.0002s2167 10.0kb upstream 10.0kb upstream 11182 true scaffold_2: 11717759-11728940 Capsella rubella
Carub.0002s2167 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11718941-11728940 Capsella rubella
Carub.0002s2167 10.0kb downstream 10.0kb downstream 11182 true scaffold_2: 11707759-11718940 Capsella rubella
Carub.0002s2167 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11707759-11717758 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377754 5261 Brassicaceae View MSA
123834713 5264 Brassicales-Malvales View MSA
124344713 5266 SBM View MSA
124240180 5268 Malvidae View MSA
124061930 5270 Rosid View MSA
123740594 5271 Pentapetalae View MSA
122785739 5272 Eudicot View MSA
122043742 5273 Angiosperm View MSA
121347549 5274 Embryophyte View MSA
123380569 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain