Gene : Carub.0002s2501 C. rubella v1.1
Defline:  (1 of 1) PTHR23083//PTHR23083:SF429 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Genomic Order:  2501
Name:  ? Carub.0002s2501 Secondary Identifier:  ? PAC:39244528
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2501 0.5kb upstream 0.5kb upstream 2734 true scaffold_2: 13068500-13071233 Capsella rubella
Carub.0002s2501 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13070734-13071233 Capsella rubella
Carub.0002s2501 0.5kb downstream 0.5kb downstream 2734 true scaffold_2: 13068000-13070733 Capsella rubella
Carub.0002s2501 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13068000-13068499 Capsella rubella
Carub.0002s2501 1.0kb upstream 1.0kb upstream 3234 true scaffold_2: 13068500-13071733 Capsella rubella
Carub.0002s2501 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13070734-13071733 Capsella rubella
Carub.0002s2501 1.0kb downstream 1.0kb downstream 3234 true scaffold_2: 13067500-13070733 Capsella rubella
Carub.0002s2501 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13067500-13068499 Capsella rubella
Carub.0002s2501 2.0kb upstream 2.0kb upstream 4234 true scaffold_2: 13068500-13072733 Capsella rubella
Carub.0002s2501 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13070734-13072733 Capsella rubella
Carub.0002s2501 2.0kb downstream 2.0kb downstream 4234 true scaffold_2: 13066500-13070733 Capsella rubella
Carub.0002s2501 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13066500-13068499 Capsella rubella
Carub.0002s2501 5.0kb upstream 5.0kb upstream 7234 true scaffold_2: 13068500-13075733 Capsella rubella
Carub.0002s2501 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13070734-13075733 Capsella rubella
Carub.0002s2501 5.0kb downstream 5.0kb downstream 7234 true scaffold_2: 13063500-13070733 Capsella rubella
Carub.0002s2501 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13063500-13068499 Capsella rubella
Carub.0002s2501 10.0kb upstream 10.0kb upstream 12234 true scaffold_2: 13068500-13080733 Capsella rubella
Carub.0002s2501 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13070734-13080733 Capsella rubella
Carub.0002s2501 10.0kb downstream 10.0kb downstream 12234 true scaffold_2: 13058500-13070733 Capsella rubella
Carub.0002s2501 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13058500-13068499 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364744 5261 Brassicaceae View MSA
123836984 5264 Brassicales-Malvales View MSA
124348383 5266 SBM View MSA
124245987 5268 Malvidae View MSA
124069860 5270 Rosid View MSA
123742749 5271 Pentapetalae View MSA
122798057 5272 Eudicot View MSA
122047040 5273 Angiosperm View MSA
121310683 5274 Embryophyte View MSA
123348108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain