Gene : Carub.0002s2515 C. rubella v1.1
Defline:  (1 of 1) PTHR10108//PTHR10108:SF899 - METHYLTRANSFERASE // PECTIN METHYLTRANSFERASE QUA2-RELATED Genomic Order:  2515
Name:  ? Carub.0002s2515 Secondary Identifier:  ? PAC:39245354
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2515 0.5kb upstream 0.5kb upstream 4402 true scaffold_2: 13110581-13114982 Capsella rubella
Carub.0002s2515 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13114483-13114982 Capsella rubella
Carub.0002s2515 0.5kb downstream 0.5kb downstream 4402 true scaffold_2: 13110081-13114482 Capsella rubella
Carub.0002s2515 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13110081-13110580 Capsella rubella
Carub.0002s2515 1.0kb upstream 1.0kb upstream 4902 true scaffold_2: 13110581-13115482 Capsella rubella
Carub.0002s2515 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13114483-13115482 Capsella rubella
Carub.0002s2515 1.0kb downstream 1.0kb downstream 4902 true scaffold_2: 13109581-13114482 Capsella rubella
Carub.0002s2515 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13109581-13110580 Capsella rubella
Carub.0002s2515 2.0kb upstream 2.0kb upstream 5902 true scaffold_2: 13110581-13116482 Capsella rubella
Carub.0002s2515 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13114483-13116482 Capsella rubella
Carub.0002s2515 2.0kb downstream 2.0kb downstream 5902 true scaffold_2: 13108581-13114482 Capsella rubella
Carub.0002s2515 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13108581-13110580 Capsella rubella
Carub.0002s2515 5.0kb upstream 5.0kb upstream 8902 true scaffold_2: 13110581-13119482 Capsella rubella
Carub.0002s2515 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13114483-13119482 Capsella rubella
Carub.0002s2515 5.0kb downstream 5.0kb downstream 8902 true scaffold_2: 13105581-13114482 Capsella rubella
Carub.0002s2515 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13105581-13110580 Capsella rubella
Carub.0002s2515 10.0kb upstream 10.0kb upstream 13902 true scaffold_2: 13110581-13124482 Capsella rubella
Carub.0002s2515 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13114483-13124482 Capsella rubella
Carub.0002s2515 10.0kb downstream 10.0kb downstream 13902 true scaffold_2: 13100581-13114482 Capsella rubella
Carub.0002s2515 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13100581-13110580 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374455 5261 Brassicaceae View MSA
123832789 5264 Brassicales-Malvales View MSA
124337729 5266 SBM View MSA
124251321 5268 Malvidae View MSA
124068394 5270 Rosid View MSA
123753010 5271 Pentapetalae View MSA
122796119 5272 Eudicot View MSA
122048389 5273 Angiosperm View MSA
121346192 5274 Embryophyte View MSA
123380346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain