Gene : Carub.0002s2289 C. rubella v1.1
Defline:  (1 of 2) PTHR13516//PTHR13516:SF9 - RIBONUCLEASE P SUBUNIT P25 // SUBFAMILY NOT NAMED Genomic Order:  2289
Name:  ? Carub.0002s2289 Secondary Identifier:  ? PAC:39244373
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2289 0.5kb upstream 0.5kb upstream 3050 true scaffold_2: 12178651-12181700 Capsella rubella
Carub.0002s2289 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12181201-12181700 Capsella rubella
Carub.0002s2289 0.5kb downstream 0.5kb downstream 3050 true scaffold_2: 12178151-12181200 Capsella rubella
Carub.0002s2289 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12178151-12178650 Capsella rubella
Carub.0002s2289 1.0kb upstream 1.0kb upstream 3550 true scaffold_2: 12178651-12182200 Capsella rubella
Carub.0002s2289 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12181201-12182200 Capsella rubella
Carub.0002s2289 1.0kb downstream 1.0kb downstream 3550 true scaffold_2: 12177651-12181200 Capsella rubella
Carub.0002s2289 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12177651-12178650 Capsella rubella
Carub.0002s2289 2.0kb upstream 2.0kb upstream 4550 true scaffold_2: 12178651-12183200 Capsella rubella
Carub.0002s2289 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12181201-12183200 Capsella rubella
Carub.0002s2289 2.0kb downstream 2.0kb downstream 4550 true scaffold_2: 12176651-12181200 Capsella rubella
Carub.0002s2289 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12176651-12178650 Capsella rubella
Carub.0002s2289 5.0kb upstream 5.0kb upstream 7550 true scaffold_2: 12178651-12186200 Capsella rubella
Carub.0002s2289 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12181201-12186200 Capsella rubella
Carub.0002s2289 5.0kb downstream 5.0kb downstream 7550 true scaffold_2: 12173651-12181200 Capsella rubella
Carub.0002s2289 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12173651-12178650 Capsella rubella
Carub.0002s2289 10.0kb upstream 10.0kb upstream 12550 true scaffold_2: 12178651-12191200 Capsella rubella
Carub.0002s2289 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12181201-12191200 Capsella rubella
Carub.0002s2289 10.0kb downstream 10.0kb downstream 12550 true scaffold_2: 12168651-12181200 Capsella rubella
Carub.0002s2289 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12168651-12178650 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378486 5261 Brassicaceae View MSA
123838579 5264 Brassicales-Malvales View MSA
124349293 5266 SBM View MSA
124248843 5268 Malvidae View MSA
124072183 5270 Rosid View MSA
123752020 5271 Pentapetalae View MSA
122793375 5272 Eudicot View MSA
122050157 5273 Angiosperm View MSA
121346602 5274 Embryophyte View MSA
123428727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain