Gene : Carub.0002s2300 C. rubella v1.1
Defline:  (1 of 2) 5.4.99.44 - Mitochondrial tRNA pseudouridine(27/28) synthase Genomic Order:  2300
Name:  ? Carub.0002s2300 Secondary Identifier:  ? PAC:39244085
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2300 0.5kb upstream 0.5kb upstream 2290 true scaffold_2: 12208984-12211273 Capsella rubella
Carub.0002s2300 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12210774-12211273 Capsella rubella
Carub.0002s2300 0.5kb downstream 0.5kb downstream 2290 true scaffold_2: 12208484-12210773 Capsella rubella
Carub.0002s2300 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12208484-12208983 Capsella rubella
Carub.0002s2300 1.0kb upstream 1.0kb upstream 2790 true scaffold_2: 12208984-12211773 Capsella rubella
Carub.0002s2300 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12210774-12211773 Capsella rubella
Carub.0002s2300 1.0kb downstream 1.0kb downstream 2790 true scaffold_2: 12207984-12210773 Capsella rubella
Carub.0002s2300 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12207984-12208983 Capsella rubella
Carub.0002s2300 2.0kb upstream 2.0kb upstream 3790 true scaffold_2: 12208984-12212773 Capsella rubella
Carub.0002s2300 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12210774-12212773 Capsella rubella
Carub.0002s2300 2.0kb downstream 2.0kb downstream 3790 true scaffold_2: 12206984-12210773 Capsella rubella
Carub.0002s2300 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12206984-12208983 Capsella rubella
Carub.0002s2300 5.0kb upstream 5.0kb upstream 6790 true scaffold_2: 12208984-12215773 Capsella rubella
Carub.0002s2300 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12210774-12215773 Capsella rubella
Carub.0002s2300 5.0kb downstream 5.0kb downstream 6790 true scaffold_2: 12203984-12210773 Capsella rubella
Carub.0002s2300 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12203984-12208983 Capsella rubella
Carub.0002s2300 10.0kb upstream 10.0kb upstream 11790 true scaffold_2: 12208984-12220773 Capsella rubella
Carub.0002s2300 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12210774-12220773 Capsella rubella
Carub.0002s2300 10.0kb downstream 10.0kb downstream 11790 true scaffold_2: 12198984-12210773 Capsella rubella
Carub.0002s2300 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12198984-12208983 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380792 5261 Brassicaceae View MSA
123838918 5264 Brassicales-Malvales View MSA
124336640 5266 SBM View MSA
124245189 5268 Malvidae View MSA
124062436 5270 Rosid View MSA
123743490 5271 Pentapetalae View MSA
122793573 5272 Eudicot View MSA
122043730 5273 Angiosperm View MSA
121347551 5274 Embryophyte View MSA
123427150 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain