Gene : Carub.0002s2293 C. rubella v1.1
Defline:  (1 of 1) 5.4.99.23 - 23S rRNA pseudouridine(1911/1915/1917) synthase Genomic Order:  2293
Name:  ? Carub.0002s2293 Secondary Identifier:  ? PAC:39243629
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2293 0.5kb upstream 0.5kb upstream 2892 true scaffold_2: 12191683-12194574 Capsella rubella
Carub.0002s2293 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12191683-12192182 Capsella rubella
Carub.0002s2293 0.5kb downstream 0.5kb downstream 2892 true scaffold_2: 12192183-12195074 Capsella rubella
Carub.0002s2293 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12194575-12195074 Capsella rubella
Carub.0002s2293 1.0kb upstream 1.0kb upstream 3392 true scaffold_2: 12191183-12194574 Capsella rubella
Carub.0002s2293 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12191183-12192182 Capsella rubella
Carub.0002s2293 1.0kb downstream 1.0kb downstream 3392 true scaffold_2: 12192183-12195574 Capsella rubella
Carub.0002s2293 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12194575-12195574 Capsella rubella
Carub.0002s2293 2.0kb upstream 2.0kb upstream 4392 true scaffold_2: 12190183-12194574 Capsella rubella
Carub.0002s2293 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12190183-12192182 Capsella rubella
Carub.0002s2293 2.0kb downstream 2.0kb downstream 4392 true scaffold_2: 12192183-12196574 Capsella rubella
Carub.0002s2293 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12194575-12196574 Capsella rubella
Carub.0002s2293 5.0kb upstream 5.0kb upstream 7392 true scaffold_2: 12187183-12194574 Capsella rubella
Carub.0002s2293 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12187183-12192182 Capsella rubella
Carub.0002s2293 5.0kb downstream 5.0kb downstream 7392 true scaffold_2: 12192183-12199574 Capsella rubella
Carub.0002s2293 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12194575-12199574 Capsella rubella
Carub.0002s2293 10.0kb upstream 10.0kb upstream 12392 true scaffold_2: 12182183-12194574 Capsella rubella
Carub.0002s2293 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12182183-12192182 Capsella rubella
Carub.0002s2293 10.0kb downstream 10.0kb downstream 12392 true scaffold_2: 12192183-12204574 Capsella rubella
Carub.0002s2293 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12194575-12204574 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366345 5261 Brassicaceae View MSA
123827875 5264 Brassicales-Malvales View MSA
124340786 5266 SBM View MSA
124242022 5268 Malvidae View MSA
124067698 5270 Rosid View MSA
123740494 5271 Pentapetalae View MSA
122788913 5272 Eudicot View MSA
122047561 5273 Angiosperm View MSA
121344474 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain