Gene : Carub.0002s2338 C. rubella v1.1
Defline:  (1 of 11) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Genomic Order:  2338
Name:  ? Carub.0002s2338 Secondary Identifier:  ? PAC:39244193
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2338 0.5kb upstream 0.5kb upstream 3662 true scaffold_2: 12349692-12353353 Capsella rubella
Carub.0002s2338 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12352854-12353353 Capsella rubella
Carub.0002s2338 0.5kb downstream 0.5kb downstream 3662 true scaffold_2: 12349192-12352853 Capsella rubella
Carub.0002s2338 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12349192-12349691 Capsella rubella
Carub.0002s2338 1.0kb upstream 1.0kb upstream 4162 true scaffold_2: 12349692-12353853 Capsella rubella
Carub.0002s2338 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12352854-12353853 Capsella rubella
Carub.0002s2338 1.0kb downstream 1.0kb downstream 4162 true scaffold_2: 12348692-12352853 Capsella rubella
Carub.0002s2338 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12348692-12349691 Capsella rubella
Carub.0002s2338 2.0kb upstream 2.0kb upstream 5162 true scaffold_2: 12349692-12354853 Capsella rubella
Carub.0002s2338 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12352854-12354853 Capsella rubella
Carub.0002s2338 2.0kb downstream 2.0kb downstream 5162 true scaffold_2: 12347692-12352853 Capsella rubella
Carub.0002s2338 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12347692-12349691 Capsella rubella
Carub.0002s2338 5.0kb upstream 5.0kb upstream 8162 true scaffold_2: 12349692-12357853 Capsella rubella
Carub.0002s2338 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12352854-12357853 Capsella rubella
Carub.0002s2338 5.0kb downstream 5.0kb downstream 8162 true scaffold_2: 12344692-12352853 Capsella rubella
Carub.0002s2338 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12344692-12349691 Capsella rubella
Carub.0002s2338 10.0kb upstream 10.0kb upstream 13162 true scaffold_2: 12349692-12362853 Capsella rubella
Carub.0002s2338 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12352854-12362853 Capsella rubella
Carub.0002s2338 10.0kb downstream 10.0kb downstream 13162 true scaffold_2: 12339692-12352853 Capsella rubella
Carub.0002s2338 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 12339692-12349691 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363818 5261 Brassicaceae View MSA
123833515 5264 Brassicales-Malvales View MSA
124340972 5266 SBM View MSA
124242149 5268 Malvidae View MSA
124065474 5270 Rosid View MSA
123753453 5271 Pentapetalae View MSA
122797686 5272 Eudicot View MSA
122043296 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121350049 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain