Gene : Carub.0002s2020 C. rubella v1.1
Genomic Order:  2020 Name:  ? Carub.0002s2020
Secondary Identifier:  ? PAC:39244375
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2020 0.5kb upstream 0.5kb upstream 3396 true scaffold_2: 11188579-11191974 Capsella rubella
Carub.0002s2020 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11188579-11189078 Capsella rubella
Carub.0002s2020 0.5kb downstream 0.5kb downstream 3396 true scaffold_2: 11189079-11192474 Capsella rubella
Carub.0002s2020 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11191975-11192474 Capsella rubella
Carub.0002s2020 1.0kb upstream 1.0kb upstream 3896 true scaffold_2: 11188079-11191974 Capsella rubella
Carub.0002s2020 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11188079-11189078 Capsella rubella
Carub.0002s2020 1.0kb downstream 1.0kb downstream 3896 true scaffold_2: 11189079-11192974 Capsella rubella
Carub.0002s2020 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11191975-11192974 Capsella rubella
Carub.0002s2020 2.0kb upstream 2.0kb upstream 4896 true scaffold_2: 11187079-11191974 Capsella rubella
Carub.0002s2020 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11187079-11189078 Capsella rubella
Carub.0002s2020 2.0kb downstream 2.0kb downstream 4896 true scaffold_2: 11189079-11193974 Capsella rubella
Carub.0002s2020 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11191975-11193974 Capsella rubella
Carub.0002s2020 5.0kb upstream 5.0kb upstream 7896 true scaffold_2: 11184079-11191974 Capsella rubella
Carub.0002s2020 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11184079-11189078 Capsella rubella
Carub.0002s2020 5.0kb downstream 5.0kb downstream 7896 true scaffold_2: 11189079-11196974 Capsella rubella
Carub.0002s2020 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11191975-11196974 Capsella rubella
Carub.0002s2020 10.0kb upstream 10.0kb upstream 12896 true scaffold_2: 11179079-11191974 Capsella rubella
Carub.0002s2020 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11179079-11189078 Capsella rubella
Carub.0002s2020 10.0kb downstream 10.0kb downstream 12896 true scaffold_2: 11189079-11201974 Capsella rubella
Carub.0002s2020 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11191975-11201974 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361944 5261 Brassicaceae View MSA
123829983 5264 Brassicales-Malvales View MSA
124339626 5266 SBM View MSA
124241426 5268 Malvidae View MSA
124064470 5270 Rosid View MSA
123737614 5271 Pentapetalae View MSA
122787250 5272 Eudicot View MSA
122047147 5273 Angiosperm View MSA
121345780 5274 Embryophyte View MSA
123424566 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain