Gene : Carub.0002s2097 C. rubella v1.1
Defline:  (1 of 8) PF14309//PF14383 - Domain of unknown function (DUF4378) (DUF4378) // DUF761-associated sequence motif (VARLMGL) Genomic Order:  2097
Name:  ? Carub.0002s2097 Secondary Identifier:  ? PAC:39244218
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2097 0.5kb upstream 0.5kb upstream 5895 true scaffold_2: 11472643-11478537 Capsella rubella
Carub.0002s2097 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11472643-11473142 Capsella rubella
Carub.0002s2097 0.5kb downstream 0.5kb downstream 5895 true scaffold_2: 11473143-11479037 Capsella rubella
Carub.0002s2097 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11478538-11479037 Capsella rubella
Carub.0002s2097 1.0kb upstream 1.0kb upstream 6395 true scaffold_2: 11472143-11478537 Capsella rubella
Carub.0002s2097 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11472143-11473142 Capsella rubella
Carub.0002s2097 1.0kb downstream 1.0kb downstream 6395 true scaffold_2: 11473143-11479537 Capsella rubella
Carub.0002s2097 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11478538-11479537 Capsella rubella
Carub.0002s2097 2.0kb upstream 2.0kb upstream 7395 true scaffold_2: 11471143-11478537 Capsella rubella
Carub.0002s2097 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11471143-11473142 Capsella rubella
Carub.0002s2097 2.0kb downstream 2.0kb downstream 7395 true scaffold_2: 11473143-11480537 Capsella rubella
Carub.0002s2097 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11478538-11480537 Capsella rubella
Carub.0002s2097 5.0kb upstream 5.0kb upstream 10395 true scaffold_2: 11468143-11478537 Capsella rubella
Carub.0002s2097 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11468143-11473142 Capsella rubella
Carub.0002s2097 5.0kb downstream 5.0kb downstream 10395 true scaffold_2: 11473143-11483537 Capsella rubella
Carub.0002s2097 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11478538-11483537 Capsella rubella
Carub.0002s2097 10.0kb upstream 10.0kb upstream 15395 true scaffold_2: 11463143-11478537 Capsella rubella
Carub.0002s2097 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11463143-11473142 Capsella rubella
Carub.0002s2097 10.0kb downstream 10.0kb downstream 15395 true scaffold_2: 11473143-11488537 Capsella rubella
Carub.0002s2097 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11478538-11488537 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362635 5261 Brassicaceae View MSA
123835119 5264 Brassicales-Malvales View MSA
124339016 5266 SBM View MSA
124238980 5268 Malvidae View MSA
124062357 5270 Rosid View MSA
123739411 5271 Pentapetalae View MSA
122786365 5272 Eudicot View MSA
122043691 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain