Gene : Carub.0002s1926 C. rubella v1.1

Defline:  (1 of 1) PTHR24074:SF10 - PROTEIN DNJ-29, ISOFORM B Genomic Order:  1926
Name:  ? Carub.0002s1926 Secondary Identifier:  ? PAC:39244666

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1926 0.5kb upstream 0.5kb upstream 1970 true scaffold_2: 10835913-10837882 Capsella rubella
Carub.0002s1926 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 10837383-10837882 Capsella rubella
Carub.0002s1926 0.5kb downstream 0.5kb downstream 1970 true scaffold_2: 10835413-10837382 Capsella rubella
Carub.0002s1926 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 10835413-10835912 Capsella rubella
Carub.0002s1926 1.0kb upstream 1.0kb upstream 2470 true scaffold_2: 10835913-10838382 Capsella rubella
Carub.0002s1926 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 10837383-10838382 Capsella rubella
Carub.0002s1926 1.0kb downstream 1.0kb downstream 2470 true scaffold_2: 10834913-10837382 Capsella rubella
Carub.0002s1926 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 10834913-10835912 Capsella rubella
Carub.0002s1926 2.0kb upstream 2.0kb upstream 3470 true scaffold_2: 10835913-10839382 Capsella rubella
Carub.0002s1926 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 10837383-10839382 Capsella rubella
Carub.0002s1926 2.0kb downstream 2.0kb downstream 3470 true scaffold_2: 10833913-10837382 Capsella rubella
Carub.0002s1926 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 10833913-10835912 Capsella rubella
Carub.0002s1926 5.0kb upstream 5.0kb upstream 6470 true scaffold_2: 10835913-10842382 Capsella rubella
Carub.0002s1926 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 10837383-10842382 Capsella rubella
Carub.0002s1926 5.0kb downstream 5.0kb downstream 6470 true scaffold_2: 10830913-10837382 Capsella rubella
Carub.0002s1926 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 10830913-10835912 Capsella rubella
Carub.0002s1926 10.0kb upstream 10.0kb upstream 11470 true scaffold_2: 10835913-10847382 Capsella rubella
Carub.0002s1926 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 10837383-10847382 Capsella rubella
Carub.0002s1926 10.0kb downstream 10.0kb downstream 11470 true scaffold_2: 10825913-10837382 Capsella rubella
Carub.0002s1926 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 10825913-10835912 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365365 5261 Brassicaceae View MSA
123837825 5264 Brassicales-Malvales View MSA
124349771 5266 SBM View MSA
124250078 5268 Malvidae View MSA
124064928 5270 Rosid View MSA
123742769 5271 Pentapetalae View MSA
122796885 5272 Eudicot View MSA
122048239 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121310900 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain