Gene : Carub.0002s1972 C. rubella v1.1
Defline:  (1 of 1) PTHR11649//PTHR11649:SF64 - MSS1/TRME-RELATED GTP-BINDING PROTEIN // PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 1 Genomic Order:  1972
Name:  ? Carub.0002s1972 Secondary Identifier:  ? PAC:39245589
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1972 0.5kb upstream 0.5kb upstream 5425 true scaffold_2: 11017064-11022488 Capsella rubella
Carub.0002s1972 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11017064-11017563 Capsella rubella
Carub.0002s1972 0.5kb downstream 0.5kb downstream 5425 true scaffold_2: 11017564-11022988 Capsella rubella
Carub.0002s1972 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11022489-11022988 Capsella rubella
Carub.0002s1972 1.0kb upstream 1.0kb upstream 5925 true scaffold_2: 11016564-11022488 Capsella rubella
Carub.0002s1972 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11016564-11017563 Capsella rubella
Carub.0002s1972 1.0kb downstream 1.0kb downstream 5925 true scaffold_2: 11017564-11023488 Capsella rubella
Carub.0002s1972 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11022489-11023488 Capsella rubella
Carub.0002s1972 2.0kb upstream 2.0kb upstream 6925 true scaffold_2: 11015564-11022488 Capsella rubella
Carub.0002s1972 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11015564-11017563 Capsella rubella
Carub.0002s1972 2.0kb downstream 2.0kb downstream 6925 true scaffold_2: 11017564-11024488 Capsella rubella
Carub.0002s1972 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11022489-11024488 Capsella rubella
Carub.0002s1972 5.0kb upstream 5.0kb upstream 9925 true scaffold_2: 11012564-11022488 Capsella rubella
Carub.0002s1972 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11012564-11017563 Capsella rubella
Carub.0002s1972 5.0kb downstream 5.0kb downstream 9925 true scaffold_2: 11017564-11027488 Capsella rubella
Carub.0002s1972 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11022489-11027488 Capsella rubella
Carub.0002s1972 10.0kb upstream 10.0kb upstream 14925 true scaffold_2: 11007564-11022488 Capsella rubella
Carub.0002s1972 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11007564-11017563 Capsella rubella
Carub.0002s1972 10.0kb downstream 10.0kb downstream 14925 true scaffold_2: 11017564-11032488 Capsella rubella
Carub.0002s1972 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11022489-11032488 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372108 5261 Brassicaceae View MSA
123800298 5264 Brassicales-Malvales View MSA
124297728 5266 SBM View MSA
124253658 5268 Malvidae View MSA
124066568 5270 Rosid View MSA
123749417 5271 Pentapetalae View MSA
122789407 5272 Eudicot View MSA
122048345 5273 Angiosperm View MSA
121345089 5274 Embryophyte View MSA
123427050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain