Gene : Carub.0002s1992 C. rubella v1.1
Defline:  (1 of 3) PTHR22880//PTHR22880:SF172 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // TRANSCRIPTION FACTOR GTE3, CHLOROPLASTIC-RELATED Genomic Order:  1992
Name:  ? Carub.0002s1992 Secondary Identifier:  ? PAC:39243168
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1992 0.5kb upstream 0.5kb upstream 2564 true scaffold_2: 11077745-11080308 Capsella rubella
Carub.0002s1992 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11079809-11080308 Capsella rubella
Carub.0002s1992 0.5kb downstream 0.5kb downstream 2564 true scaffold_2: 11077245-11079808 Capsella rubella
Carub.0002s1992 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11077245-11077744 Capsella rubella
Carub.0002s1992 1.0kb upstream 1.0kb upstream 3064 true scaffold_2: 11077745-11080808 Capsella rubella
Carub.0002s1992 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11079809-11080808 Capsella rubella
Carub.0002s1992 1.0kb downstream 1.0kb downstream 3064 true scaffold_2: 11076745-11079808 Capsella rubella
Carub.0002s1992 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11076745-11077744 Capsella rubella
Carub.0002s1992 2.0kb upstream 2.0kb upstream 4064 true scaffold_2: 11077745-11081808 Capsella rubella
Carub.0002s1992 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11079809-11081808 Capsella rubella
Carub.0002s1992 2.0kb downstream 2.0kb downstream 4064 true scaffold_2: 11075745-11079808 Capsella rubella
Carub.0002s1992 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11075745-11077744 Capsella rubella
Carub.0002s1992 5.0kb upstream 5.0kb upstream 7064 true scaffold_2: 11077745-11084808 Capsella rubella
Carub.0002s1992 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11079809-11084808 Capsella rubella
Carub.0002s1992 5.0kb downstream 5.0kb downstream 7064 true scaffold_2: 11072745-11079808 Capsella rubella
Carub.0002s1992 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11072745-11077744 Capsella rubella
Carub.0002s1992 10.0kb upstream 10.0kb upstream 12064 true scaffold_2: 11077745-11089808 Capsella rubella
Carub.0002s1992 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11079809-11089808 Capsella rubella
Carub.0002s1992 10.0kb downstream 10.0kb downstream 12064 true scaffold_2: 11067745-11079808 Capsella rubella
Carub.0002s1992 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11067745-11077744 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380648 5261 Brassicaceae View MSA
123802827 5264 Brassicales-Malvales View MSA
124299991 5266 SBM View MSA
124253810 5268 Malvidae View MSA
124051419 5270 Rosid View MSA
123750447 5271 Pentapetalae View MSA
122794064 5272 Eudicot View MSA
122046365 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121348953 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain