Gene : Carub.0002s1804 C. rubella v1.1

Defline:  (1 of 2) PTHR15492//PTHR15492:SF1 - FAMILY NOT NAMED // CYCLIN-D1-BINDING PROTEIN 1 Genomic Order:  1804
Name:  ? Carub.0002s1804 Secondary Identifier:  ? PAC:39245000

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1804 0.5kb upstream 0.5kb upstream 2065 true scaffold_2: 10360066-10362130 Capsella rubella
Carub.0002s1804 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 10360066-10360565 Capsella rubella
Carub.0002s1804 0.5kb downstream 0.5kb downstream 2065 true scaffold_2: 10360566-10362630 Capsella rubella
Carub.0002s1804 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 10362131-10362630 Capsella rubella
Carub.0002s1804 1.0kb upstream 1.0kb upstream 2565 true scaffold_2: 10359566-10362130 Capsella rubella
Carub.0002s1804 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 10359566-10360565 Capsella rubella
Carub.0002s1804 1.0kb downstream 1.0kb downstream 2565 true scaffold_2: 10360566-10363130 Capsella rubella
Carub.0002s1804 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 10362131-10363130 Capsella rubella
Carub.0002s1804 2.0kb upstream 2.0kb upstream 3565 true scaffold_2: 10358566-10362130 Capsella rubella
Carub.0002s1804 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 10358566-10360565 Capsella rubella
Carub.0002s1804 2.0kb downstream 2.0kb downstream 3565 true scaffold_2: 10360566-10364130 Capsella rubella
Carub.0002s1804 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 10362131-10364130 Capsella rubella
Carub.0002s1804 5.0kb upstream 5.0kb upstream 6565 true scaffold_2: 10355566-10362130 Capsella rubella
Carub.0002s1804 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 10355566-10360565 Capsella rubella
Carub.0002s1804 5.0kb downstream 5.0kb downstream 6565 true scaffold_2: 10360566-10367130 Capsella rubella
Carub.0002s1804 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 10362131-10367130 Capsella rubella
Carub.0002s1804 10.0kb upstream 10.0kb upstream 11565 true scaffold_2: 10350566-10362130 Capsella rubella
Carub.0002s1804 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 10350566-10360565 Capsella rubella
Carub.0002s1804 10.0kb downstream 10.0kb downstream 11565 true scaffold_2: 10360566-10372130 Capsella rubella
Carub.0002s1804 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 10362131-10372130 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338528 5261 Brassicaceae View MSA
123779094 5264 Brassicales-Malvales View MSA
124277427 5266 SBM View MSA
124243951 5268 Malvidae View MSA
124062519 5270 Rosid View MSA
123740385 5271 Pentapetalae View MSA
122788529 5272 Eudicot View MSA
122041727 5273 Angiosperm View MSA
121346994 5274 Embryophyte View MSA
123425280 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain