Gene : Carub.0002s1801 C. rubella v1.1
Defline:  (1 of 16) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED Genomic Order:  1801
Name:  ? Carub.0002s1801 Secondary Identifier:  ? PAC:39243513
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1801 0.5kb upstream 0.5kb upstream 2799 true scaffold_2: 10352287-10355085 Capsella rubella
Carub.0002s1801 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 10352287-10352786 Capsella rubella
Carub.0002s1801 0.5kb downstream 0.5kb downstream 2799 true scaffold_2: 10352787-10355585 Capsella rubella
Carub.0002s1801 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 10355086-10355585 Capsella rubella
Carub.0002s1801 1.0kb upstream 1.0kb upstream 3299 true scaffold_2: 10351787-10355085 Capsella rubella
Carub.0002s1801 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 10351787-10352786 Capsella rubella
Carub.0002s1801 1.0kb downstream 1.0kb downstream 3299 true scaffold_2: 10352787-10356085 Capsella rubella
Carub.0002s1801 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 10355086-10356085 Capsella rubella
Carub.0002s1801 2.0kb upstream 2.0kb upstream 4299 true scaffold_2: 10350787-10355085 Capsella rubella
Carub.0002s1801 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 10350787-10352786 Capsella rubella
Carub.0002s1801 2.0kb downstream 2.0kb downstream 4299 true scaffold_2: 10352787-10357085 Capsella rubella
Carub.0002s1801 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 10355086-10357085 Capsella rubella
Carub.0002s1801 5.0kb upstream 5.0kb upstream 7299 true scaffold_2: 10347787-10355085 Capsella rubella
Carub.0002s1801 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 10347787-10352786 Capsella rubella
Carub.0002s1801 5.0kb downstream 5.0kb downstream 7299 true scaffold_2: 10352787-10360085 Capsella rubella
Carub.0002s1801 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 10355086-10360085 Capsella rubella
Carub.0002s1801 10.0kb upstream 10.0kb upstream 12299 true scaffold_2: 10342787-10355085 Capsella rubella
Carub.0002s1801 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 10342787-10352786 Capsella rubella
Carub.0002s1801 10.0kb downstream 10.0kb downstream 12299 true scaffold_2: 10352787-10365085 Capsella rubella
Carub.0002s1801 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 10355086-10365085 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376703 5261 Brassicaceae View MSA
123841604 5264 Brassicales-Malvales View MSA
124349930 5266 SBM View MSA
124254486 5268 Malvidae View MSA
124070136 5270 Rosid View MSA
123747121 5271 Pentapetalae View MSA
122794225 5272 Eudicot View MSA
122042479 5273 Angiosperm View MSA
121350842 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain