Gene : Carub.0002s1815 C. rubella v1.1
Defline:  (1 of 2) PTHR14190:SF7 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 52 HOMOLOG Genomic Order:  1815
Name:  ? Carub.0002s1815 Secondary Identifier:  ? PAC:39243019
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1815 0.5kb upstream 0.5kb upstream 6739 true scaffold_2: 10393754-10400492 Capsella rubella
Carub.0002s1815 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 10393754-10394253 Capsella rubella
Carub.0002s1815 0.5kb downstream 0.5kb downstream 6739 true scaffold_2: 10394254-10400992 Capsella rubella
Carub.0002s1815 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 10400493-10400992 Capsella rubella
Carub.0002s1815 1.0kb upstream 1.0kb upstream 7239 true scaffold_2: 10393254-10400492 Capsella rubella
Carub.0002s1815 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 10393254-10394253 Capsella rubella
Carub.0002s1815 1.0kb downstream 1.0kb downstream 7239 true scaffold_2: 10394254-10401492 Capsella rubella
Carub.0002s1815 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 10400493-10401492 Capsella rubella
Carub.0002s1815 2.0kb upstream 2.0kb upstream 8239 true scaffold_2: 10392254-10400492 Capsella rubella
Carub.0002s1815 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 10392254-10394253 Capsella rubella
Carub.0002s1815 2.0kb downstream 2.0kb downstream 8239 true scaffold_2: 10394254-10402492 Capsella rubella
Carub.0002s1815 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 10400493-10402492 Capsella rubella
Carub.0002s1815 5.0kb upstream 5.0kb upstream 11239 true scaffold_2: 10389254-10400492 Capsella rubella
Carub.0002s1815 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 10389254-10394253 Capsella rubella
Carub.0002s1815 5.0kb downstream 5.0kb downstream 11239 true scaffold_2: 10394254-10405492 Capsella rubella
Carub.0002s1815 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 10400493-10405492 Capsella rubella
Carub.0002s1815 10.0kb upstream 10.0kb upstream 16239 true scaffold_2: 10384254-10400492 Capsella rubella
Carub.0002s1815 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 10384254-10394253 Capsella rubella
Carub.0002s1815 10.0kb downstream 10.0kb downstream 16239 true scaffold_2: 10394254-10410492 Capsella rubella
Carub.0002s1815 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 10400493-10410492 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367940 5261 Brassicaceae View MSA
123831276 5264 Brassicales-Malvales View MSA
124345712 5266 SBM View MSA
124239789 5268 Malvidae View MSA
124065275 5270 Rosid View MSA
123738224 5271 Pentapetalae View MSA
122792330 5272 Eudicot View MSA
122043794 5273 Angiosperm View MSA
121345189 5274 Embryophyte View MSA
123425999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain