Gene : Carub.0002s2061 C. rubella v1.1
Defline:  (1 of 5) PF07891 - Protein of unknown function (DUF1666) (DUF1666) Genomic Order:  2061
Name:  ? Carub.0002s2061 Secondary Identifier:  ? PAC:39245829
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2061 0.5kb upstream 0.5kb upstream 4293 true scaffold_2: 11346187-11350479 Capsella rubella
Carub.0002s2061 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11346187-11346686 Capsella rubella
Carub.0002s2061 0.5kb downstream 0.5kb downstream 4293 true scaffold_2: 11346687-11350979 Capsella rubella
Carub.0002s2061 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11350480-11350979 Capsella rubella
Carub.0002s2061 1.0kb upstream 1.0kb upstream 4793 true scaffold_2: 11345687-11350479 Capsella rubella
Carub.0002s2061 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11345687-11346686 Capsella rubella
Carub.0002s2061 1.0kb downstream 1.0kb downstream 4793 true scaffold_2: 11346687-11351479 Capsella rubella
Carub.0002s2061 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11350480-11351479 Capsella rubella
Carub.0002s2061 2.0kb upstream 2.0kb upstream 5793 true scaffold_2: 11344687-11350479 Capsella rubella
Carub.0002s2061 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11344687-11346686 Capsella rubella
Carub.0002s2061 2.0kb downstream 2.0kb downstream 5793 true scaffold_2: 11346687-11352479 Capsella rubella
Carub.0002s2061 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11350480-11352479 Capsella rubella
Carub.0002s2061 5.0kb upstream 5.0kb upstream 8793 true scaffold_2: 11341687-11350479 Capsella rubella
Carub.0002s2061 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11341687-11346686 Capsella rubella
Carub.0002s2061 5.0kb downstream 5.0kb downstream 8793 true scaffold_2: 11346687-11355479 Capsella rubella
Carub.0002s2061 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11350480-11355479 Capsella rubella
Carub.0002s2061 10.0kb upstream 10.0kb upstream 13793 true scaffold_2: 11336687-11350479 Capsella rubella
Carub.0002s2061 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11336687-11346686 Capsella rubella
Carub.0002s2061 10.0kb downstream 10.0kb downstream 13793 true scaffold_2: 11346687-11360479 Capsella rubella
Carub.0002s2061 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11350480-11360479 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363095 5261 Brassicaceae View MSA
123835542 5264 Brassicales-Malvales View MSA
124345271 5266 SBM View MSA
124242129 5268 Malvidae View MSA
124068930 5270 Rosid View MSA
123742877 5271 Pentapetalae View MSA
122788771 5272 Eudicot View MSA
122042848 5273 Angiosperm View MSA
121310034 5274 Embryophyte View MSA
123347637 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain