Gene : Carub.0002s2077 C. rubella v1.1
Defline:  (1 of 1) K04773 - protease IV [EC:3.4.21.-] (sppA) Genomic Order:  2077
Name:  ? Carub.0002s2077 Secondary Identifier:  ? PAC:39245689
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s2077 0.5kb upstream 0.5kb upstream 4954 true scaffold_2: 11411112-11416065 Capsella rubella
Carub.0002s2077 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11411112-11411611 Capsella rubella
Carub.0002s2077 0.5kb downstream 0.5kb downstream 4954 true scaffold_2: 11411612-11416565 Capsella rubella
Carub.0002s2077 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11416066-11416565 Capsella rubella
Carub.0002s2077 1.0kb upstream 1.0kb upstream 5454 true scaffold_2: 11410612-11416065 Capsella rubella
Carub.0002s2077 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11410612-11411611 Capsella rubella
Carub.0002s2077 1.0kb downstream 1.0kb downstream 5454 true scaffold_2: 11411612-11417065 Capsella rubella
Carub.0002s2077 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11416066-11417065 Capsella rubella
Carub.0002s2077 2.0kb upstream 2.0kb upstream 6454 true scaffold_2: 11409612-11416065 Capsella rubella
Carub.0002s2077 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11409612-11411611 Capsella rubella
Carub.0002s2077 2.0kb downstream 2.0kb downstream 6454 true scaffold_2: 11411612-11418065 Capsella rubella
Carub.0002s2077 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11416066-11418065 Capsella rubella
Carub.0002s2077 5.0kb upstream 5.0kb upstream 9454 true scaffold_2: 11406612-11416065 Capsella rubella
Carub.0002s2077 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11406612-11411611 Capsella rubella
Carub.0002s2077 5.0kb downstream 5.0kb downstream 9454 true scaffold_2: 11411612-11421065 Capsella rubella
Carub.0002s2077 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11416066-11421065 Capsella rubella
Carub.0002s2077 10.0kb upstream 10.0kb upstream 14454 true scaffold_2: 11401612-11416065 Capsella rubella
Carub.0002s2077 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11401612-11411611 Capsella rubella
Carub.0002s2077 10.0kb downstream 10.0kb downstream 14454 true scaffold_2: 11411612-11426065 Capsella rubella
Carub.0002s2077 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11416066-11426065 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372718 5261 Brassicaceae View MSA
123833964 5264 Brassicales-Malvales View MSA
124336701 5266 SBM View MSA
124243419 5268 Malvidae View MSA
124067655 5270 Rosid View MSA
123738820 5271 Pentapetalae View MSA
122785684 5272 Eudicot View MSA
122045424 5273 Angiosperm View MSA
121344928 5274 Embryophyte View MSA
123424112 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain