Gene : Carub.0006s0981 C. rubella v1.1
Defline:  (1 of 1) PTHR12121//PTHR12121:SF48 - CARBON CATABOLITE REPRESSOR PROTEIN 4 // CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 Genomic Order:  981
Name:  ? Carub.0006s0981 Secondary Identifier:  ? PAC:39249032
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0981 0.5kb upstream 0.5kb upstream 5052 true scaffold_6: 3578437-3583488 Capsella rubella
Carub.0006s0981 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3578437-3578936 Capsella rubella
Carub.0006s0981 0.5kb downstream 0.5kb downstream 5052 true scaffold_6: 3578937-3583988 Capsella rubella
Carub.0006s0981 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3583489-3583988 Capsella rubella
Carub.0006s0981 1.0kb upstream 1.0kb upstream 5552 true scaffold_6: 3577937-3583488 Capsella rubella
Carub.0006s0981 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3577937-3578936 Capsella rubella
Carub.0006s0981 1.0kb downstream 1.0kb downstream 5552 true scaffold_6: 3578937-3584488 Capsella rubella
Carub.0006s0981 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3583489-3584488 Capsella rubella
Carub.0006s0981 2.0kb upstream 2.0kb upstream 6552 true scaffold_6: 3576937-3583488 Capsella rubella
Carub.0006s0981 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3576937-3578936 Capsella rubella
Carub.0006s0981 2.0kb downstream 2.0kb downstream 6552 true scaffold_6: 3578937-3585488 Capsella rubella
Carub.0006s0981 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3583489-3585488 Capsella rubella
Carub.0006s0981 5.0kb upstream 5.0kb upstream 9552 true scaffold_6: 3573937-3583488 Capsella rubella
Carub.0006s0981 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3573937-3578936 Capsella rubella
Carub.0006s0981 5.0kb downstream 5.0kb downstream 9552 true scaffold_6: 3578937-3588488 Capsella rubella
Carub.0006s0981 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3583489-3588488 Capsella rubella
Carub.0006s0981 10.0kb upstream 10.0kb upstream 14552 true scaffold_6: 3568937-3583488 Capsella rubella
Carub.0006s0981 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3568937-3578936 Capsella rubella
Carub.0006s0981 10.0kb downstream 10.0kb downstream 14552 true scaffold_6: 3578937-3593488 Capsella rubella
Carub.0006s0981 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3583489-3593488 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367869 5261 Brassicaceae View MSA
123836418 5264 Brassicales-Malvales View MSA
124338753 5266 SBM View MSA
124242719 5268 Malvidae View MSA
124066048 5270 Rosid View MSA
123737672 5271 Pentapetalae View MSA
122788229 5272 Eudicot View MSA
122041541 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain