Gene : Carub.0008s1275 C. rubella v1.1
Defline:  (1 of 56) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  1275
Name:  ? Carub.0008s1275 Secondary Identifier:  ? PAC:39251421
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1275 0.5kb upstream 0.5kb upstream 2338 true scaffold_8: 7401163-7403500 Capsella rubella
Carub.0008s1275 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 7401163-7401662 Capsella rubella
Carub.0008s1275 0.5kb downstream 0.5kb downstream 2338 true scaffold_8: 7401663-7404000 Capsella rubella
Carub.0008s1275 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 7403501-7404000 Capsella rubella
Carub.0008s1275 1.0kb upstream 1.0kb upstream 2838 true scaffold_8: 7400663-7403500 Capsella rubella
Carub.0008s1275 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 7400663-7401662 Capsella rubella
Carub.0008s1275 1.0kb downstream 1.0kb downstream 2838 true scaffold_8: 7401663-7404500 Capsella rubella
Carub.0008s1275 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 7403501-7404500 Capsella rubella
Carub.0008s1275 2.0kb upstream 2.0kb upstream 3838 true scaffold_8: 7399663-7403500 Capsella rubella
Carub.0008s1275 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 7399663-7401662 Capsella rubella
Carub.0008s1275 2.0kb downstream 2.0kb downstream 3838 true scaffold_8: 7401663-7405500 Capsella rubella
Carub.0008s1275 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 7403501-7405500 Capsella rubella
Carub.0008s1275 5.0kb upstream 5.0kb upstream 6838 true scaffold_8: 7396663-7403500 Capsella rubella
Carub.0008s1275 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 7396663-7401662 Capsella rubella
Carub.0008s1275 5.0kb downstream 5.0kb downstream 6838 true scaffold_8: 7401663-7408500 Capsella rubella
Carub.0008s1275 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 7403501-7408500 Capsella rubella
Carub.0008s1275 10.0kb upstream 10.0kb upstream 11838 true scaffold_8: 7391663-7403500 Capsella rubella
Carub.0008s1275 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 7391663-7401662 Capsella rubella
Carub.0008s1275 10.0kb downstream 10.0kb downstream 11838 true scaffold_8: 7401663-7413500 Capsella rubella
Carub.0008s1275 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 7403501-7413500 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372058 5261 Brassicaceae View MSA
123831060 5264 Brassicales-Malvales View MSA
124341624 5266 SBM View MSA
124252420 5268 Malvidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain