Gene : Carub.0008s0607 C. rubella v1.1

Defline:  (1 of 1) PTHR12452 - 42-9-9 PROTEIN-RELATED Genomic Order:  607
Name:  ? Carub.0008s0607 Secondary Identifier:  ? PAC:39252649

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0607 0.5kb upstream 0.5kb upstream 1378 true scaffold_8: 2784555-2785932 Capsella rubella
Carub.0008s0607 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2784555-2785054 Capsella rubella
Carub.0008s0607 0.5kb downstream 0.5kb downstream 1378 true scaffold_8: 2785055-2786432 Capsella rubella
Carub.0008s0607 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2785933-2786432 Capsella rubella
Carub.0008s0607 1.0kb upstream 1.0kb upstream 1878 true scaffold_8: 2784055-2785932 Capsella rubella
Carub.0008s0607 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2784055-2785054 Capsella rubella
Carub.0008s0607 1.0kb downstream 1.0kb downstream 1878 true scaffold_8: 2785055-2786932 Capsella rubella
Carub.0008s0607 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2785933-2786932 Capsella rubella
Carub.0008s0607 2.0kb upstream 2.0kb upstream 2878 true scaffold_8: 2783055-2785932 Capsella rubella
Carub.0008s0607 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2783055-2785054 Capsella rubella
Carub.0008s0607 2.0kb downstream 2.0kb downstream 2878 true scaffold_8: 2785055-2787932 Capsella rubella
Carub.0008s0607 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2785933-2787932 Capsella rubella
Carub.0008s0607 5.0kb upstream 5.0kb upstream 5878 true scaffold_8: 2780055-2785932 Capsella rubella
Carub.0008s0607 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2780055-2785054 Capsella rubella
Carub.0008s0607 5.0kb downstream 5.0kb downstream 5878 true scaffold_8: 2785055-2790932 Capsella rubella
Carub.0008s0607 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2785933-2790932 Capsella rubella
Carub.0008s0607 10.0kb upstream 10.0kb upstream 10878 true scaffold_8: 2775055-2785932 Capsella rubella
Carub.0008s0607 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2775055-2785054 Capsella rubella
Carub.0008s0607 10.0kb downstream 10.0kb downstream 10878 true scaffold_8: 2785055-2795932 Capsella rubella
Carub.0008s0607 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2785933-2795932 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366882 5261 Brassicaceae View MSA
123832177 5264 Brassicales-Malvales View MSA
124340916 5266 SBM View MSA
124238149 5268 Malvidae View MSA
124062301 5270 Rosid View MSA
123739980 5271 Pentapetalae View MSA
122791634 5272 Eudicot View MSA
122046977 5273 Angiosperm View MSA
121346988 5274 Embryophyte View MSA
123427976 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain