Gene : Carub.0008s0605 C. rubella v1.1
Defline:  (1 of 5) PTHR24078:SF279 - DUPLICATED SANT DNA-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  605
Name:  ? Carub.0008s0605 Secondary Identifier:  ? PAC:39252772
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0605 0.5kb upstream 0.5kb upstream 1796 true scaffold_8: 2777079-2778874 Capsella rubella
Carub.0008s0605 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2778375-2778874 Capsella rubella
Carub.0008s0605 0.5kb downstream 0.5kb downstream 1796 true scaffold_8: 2776579-2778374 Capsella rubella
Carub.0008s0605 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2776579-2777078 Capsella rubella
Carub.0008s0605 1.0kb upstream 1.0kb upstream 2296 true scaffold_8: 2777079-2779374 Capsella rubella
Carub.0008s0605 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2778375-2779374 Capsella rubella
Carub.0008s0605 1.0kb downstream 1.0kb downstream 2296 true scaffold_8: 2776079-2778374 Capsella rubella
Carub.0008s0605 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2776079-2777078 Capsella rubella
Carub.0008s0605 2.0kb upstream 2.0kb upstream 3296 true scaffold_8: 2777079-2780374 Capsella rubella
Carub.0008s0605 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2778375-2780374 Capsella rubella
Carub.0008s0605 2.0kb downstream 2.0kb downstream 3296 true scaffold_8: 2775079-2778374 Capsella rubella
Carub.0008s0605 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2775079-2777078 Capsella rubella
Carub.0008s0605 5.0kb upstream 5.0kb upstream 6296 true scaffold_8: 2777079-2783374 Capsella rubella
Carub.0008s0605 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2778375-2783374 Capsella rubella
Carub.0008s0605 5.0kb downstream 5.0kb downstream 6296 true scaffold_8: 2772079-2778374 Capsella rubella
Carub.0008s0605 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2772079-2777078 Capsella rubella
Carub.0008s0605 10.0kb upstream 10.0kb upstream 11296 true scaffold_8: 2777079-2788374 Capsella rubella
Carub.0008s0605 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2778375-2788374 Capsella rubella
Carub.0008s0605 10.0kb downstream 10.0kb downstream 11296 true scaffold_8: 2767079-2778374 Capsella rubella
Carub.0008s0605 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2767079-2777078 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337222 5261 Brassicaceae Singleton cluster - no MSA
123842992 5264 Brassicales-Malvales View MSA
124323917 5266 SBM View MSA
124169677 5268 Malvidae View MSA
123892551 5270 Rosid View MSA
123750752 5271 Pentapetalae View MSA
122788591 5272 Eudicot View MSA
122045009 5273 Angiosperm View MSA
121349410 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain