Gene : Carub.0008s0955 C. rubella v1.1
Defline:  (1 of 1) PTHR15678//PTHR15678:SF8 - ANTIGEN MLAA-22-RELATED // SUBFAMILY NOT NAMED Genomic Order:  955
Name:  ? Carub.0008s0955 Secondary Identifier:  ? PAC:39251104
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0955 0.5kb upstream 0.5kb upstream 13113 true scaffold_8: 6084988-6098100 Capsella rubella
Carub.0008s0955 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6084988-6085487 Capsella rubella
Carub.0008s0955 0.5kb downstream 0.5kb downstream 13113 true scaffold_8: 6085488-6098600 Capsella rubella
Carub.0008s0955 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6098101-6098600 Capsella rubella
Carub.0008s0955 1.0kb upstream 1.0kb upstream 13613 true scaffold_8: 6084488-6098100 Capsella rubella
Carub.0008s0955 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6084488-6085487 Capsella rubella
Carub.0008s0955 1.0kb downstream 1.0kb downstream 13613 true scaffold_8: 6085488-6099100 Capsella rubella
Carub.0008s0955 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6098101-6099100 Capsella rubella
Carub.0008s0955 2.0kb upstream 2.0kb upstream 14613 true scaffold_8: 6083488-6098100 Capsella rubella
Carub.0008s0955 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6083488-6085487 Capsella rubella
Carub.0008s0955 2.0kb downstream 2.0kb downstream 14613 true scaffold_8: 6085488-6100100 Capsella rubella
Carub.0008s0955 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6098101-6100100 Capsella rubella
Carub.0008s0955 5.0kb upstream 5.0kb upstream 17613 true scaffold_8: 6080488-6098100 Capsella rubella
Carub.0008s0955 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6080488-6085487 Capsella rubella
Carub.0008s0955 5.0kb downstream 5.0kb downstream 17613 true scaffold_8: 6085488-6103100 Capsella rubella
Carub.0008s0955 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6098101-6103100 Capsella rubella
Carub.0008s0955 10.0kb upstream 10.0kb upstream 22613 true scaffold_8: 6075488-6098100 Capsella rubella
Carub.0008s0955 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6075488-6085487 Capsella rubella
Carub.0008s0955 10.0kb downstream 10.0kb downstream 22613 true scaffold_8: 6085488-6108100 Capsella rubella
Carub.0008s0955 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6098101-6108100 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364482 5261 Brassicaceae View MSA
123839633 5264 Brassicales-Malvales View MSA
124342514 5266 SBM View MSA
124237607 5268 Malvidae View MSA
124067237 5270 Rosid View MSA
123743501 5271 Pentapetalae View MSA
122787357 5272 Eudicot View MSA
122044686 5273 Angiosperm View MSA
121349387 5274 Embryophyte View MSA
123381291 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain