Gene : Carub.0006s0808 C. rubella v1.1
Defline:  (1 of 7) K02958 - small subunit ribosomal protein S15e (RP-S15e, RPS15) Genomic Order:  808
Name:  ? Carub.0006s0808 Secondary Identifier:  ? PAC:39246105
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0808 0.5kb upstream 0.5kb upstream 1656 true scaffold_6: 2949124-2950779 Capsella rubella
Carub.0006s0808 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2950280-2950779 Capsella rubella
Carub.0006s0808 0.5kb downstream 0.5kb downstream 1656 true scaffold_6: 2948624-2950279 Capsella rubella
Carub.0006s0808 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2948624-2949123 Capsella rubella
Carub.0006s0808 1.0kb upstream 1.0kb upstream 2156 true scaffold_6: 2949124-2951279 Capsella rubella
Carub.0006s0808 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2950280-2951279 Capsella rubella
Carub.0006s0808 1.0kb downstream 1.0kb downstream 2156 true scaffold_6: 2948124-2950279 Capsella rubella
Carub.0006s0808 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2948124-2949123 Capsella rubella
Carub.0006s0808 2.0kb upstream 2.0kb upstream 3156 true scaffold_6: 2949124-2952279 Capsella rubella
Carub.0006s0808 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2950280-2952279 Capsella rubella
Carub.0006s0808 2.0kb downstream 2.0kb downstream 3156 true scaffold_6: 2947124-2950279 Capsella rubella
Carub.0006s0808 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2947124-2949123 Capsella rubella
Carub.0006s0808 5.0kb upstream 5.0kb upstream 6156 true scaffold_6: 2949124-2955279 Capsella rubella
Carub.0006s0808 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2950280-2955279 Capsella rubella
Carub.0006s0808 5.0kb downstream 5.0kb downstream 6156 true scaffold_6: 2944124-2950279 Capsella rubella
Carub.0006s0808 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2944124-2949123 Capsella rubella
Carub.0006s0808 10.0kb upstream 10.0kb upstream 11156 true scaffold_6: 2949124-2960279 Capsella rubella
Carub.0006s0808 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2950280-2960279 Capsella rubella
Carub.0006s0808 10.0kb downstream 10.0kb downstream 11156 true scaffold_6: 2939124-2950279 Capsella rubella
Carub.0006s0808 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2939124-2949123 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378956 5261 Brassicaceae View MSA
123834397 5264 Brassicales-Malvales View MSA
124339038 5266 SBM View MSA
124247186 5268 Malvidae View MSA
124072924 5270 Rosid View MSA
123737007 5271 Pentapetalae View MSA
122786475 5272 Eudicot View MSA
122041885 5273 Angiosperm View MSA
121349053 5274 Embryophyte View MSA
123425446 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain