Gene : Carub.0008s1157 C. rubella v1.1
Defline:  (1 of 1) 3.4.24.59 - Mitochondrial intermediate peptidase Genomic Order:  1157
Name:  ? Carub.0008s1157 Secondary Identifier:  ? PAC:39252280
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1157 0.5kb upstream 0.5kb upstream 4732 true scaffold_8: 6906879-6911610 Capsella rubella
Carub.0008s1157 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6906879-6907378 Capsella rubella
Carub.0008s1157 0.5kb downstream 0.5kb downstream 4732 true scaffold_8: 6907379-6912110 Capsella rubella
Carub.0008s1157 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6911611-6912110 Capsella rubella
Carub.0008s1157 1.0kb upstream 1.0kb upstream 5232 true scaffold_8: 6906379-6911610 Capsella rubella
Carub.0008s1157 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6906379-6907378 Capsella rubella
Carub.0008s1157 1.0kb downstream 1.0kb downstream 5232 true scaffold_8: 6907379-6912610 Capsella rubella
Carub.0008s1157 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6911611-6912610 Capsella rubella
Carub.0008s1157 2.0kb upstream 2.0kb upstream 6232 true scaffold_8: 6905379-6911610 Capsella rubella
Carub.0008s1157 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6905379-6907378 Capsella rubella
Carub.0008s1157 2.0kb downstream 2.0kb downstream 6232 true scaffold_8: 6907379-6913610 Capsella rubella
Carub.0008s1157 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6911611-6913610 Capsella rubella
Carub.0008s1157 5.0kb upstream 5.0kb upstream 9232 true scaffold_8: 6902379-6911610 Capsella rubella
Carub.0008s1157 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6902379-6907378 Capsella rubella
Carub.0008s1157 5.0kb downstream 5.0kb downstream 9232 true scaffold_8: 6907379-6916610 Capsella rubella
Carub.0008s1157 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6911611-6916610 Capsella rubella
Carub.0008s1157 10.0kb upstream 10.0kb upstream 14232 true scaffold_8: 6897379-6911610 Capsella rubella
Carub.0008s1157 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6897379-6907378 Capsella rubella
Carub.0008s1157 10.0kb downstream 10.0kb downstream 14232 true scaffold_8: 6907379-6921610 Capsella rubella
Carub.0008s1157 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6911611-6921610 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337175 5261 Brassicaceae Singleton cluster - no MSA
123841500 5264 Brassicales-Malvales View MSA
124342353 5266 SBM View MSA
124240300 5268 Malvidae View MSA
124071882 5270 Rosid View MSA
123740911 5271 Pentapetalae View MSA
122790063 5272 Eudicot View MSA
122047450 5273 Angiosperm View MSA
121347526 5274 Embryophyte View MSA
123424880 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain