Gene : Carub.0008s1161 C. rubella v1.1
Defline:  (1 of 1) PTHR10264:SF69 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 4 Genomic Order:  1161
Name:  ? Carub.0008s1161 Secondary Identifier:  ? PAC:39250497
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1161 0.5kb upstream 0.5kb upstream 2354 true scaffold_8: 6927174-6929527 Capsella rubella
Carub.0008s1161 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6927174-6927673 Capsella rubella
Carub.0008s1161 0.5kb downstream 0.5kb downstream 2354 true scaffold_8: 6927674-6930027 Capsella rubella
Carub.0008s1161 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6929528-6930027 Capsella rubella
Carub.0008s1161 1.0kb upstream 1.0kb upstream 2854 true scaffold_8: 6926674-6929527 Capsella rubella
Carub.0008s1161 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6926674-6927673 Capsella rubella
Carub.0008s1161 1.0kb downstream 1.0kb downstream 2854 true scaffold_8: 6927674-6930527 Capsella rubella
Carub.0008s1161 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6929528-6930527 Capsella rubella
Carub.0008s1161 2.0kb upstream 2.0kb upstream 3854 true scaffold_8: 6925674-6929527 Capsella rubella
Carub.0008s1161 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6925674-6927673 Capsella rubella
Carub.0008s1161 2.0kb downstream 2.0kb downstream 3854 true scaffold_8: 6927674-6931527 Capsella rubella
Carub.0008s1161 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6929528-6931527 Capsella rubella
Carub.0008s1161 5.0kb upstream 5.0kb upstream 6854 true scaffold_8: 6922674-6929527 Capsella rubella
Carub.0008s1161 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6922674-6927673 Capsella rubella
Carub.0008s1161 5.0kb downstream 5.0kb downstream 6854 true scaffold_8: 6927674-6934527 Capsella rubella
Carub.0008s1161 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6929528-6934527 Capsella rubella
Carub.0008s1161 10.0kb upstream 10.0kb upstream 11854 true scaffold_8: 6917674-6929527 Capsella rubella
Carub.0008s1161 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6917674-6927673 Capsella rubella
Carub.0008s1161 10.0kb downstream 10.0kb downstream 11854 true scaffold_8: 6927674-6939527 Capsella rubella
Carub.0008s1161 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6929528-6939527 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366958 5261 Brassicaceae View MSA
123835116 5264 Brassicales-Malvales View MSA
124339648 5266 SBM View MSA
124242568 5268 Malvidae View MSA
124064454 5270 Rosid View MSA
123736797 5271 Pentapetalae View MSA
122786517 5272 Eudicot View MSA
122047098 5273 Angiosperm View MSA
121346579 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain