Gene : Carub.0008s1172 C. rubella v1.1

Defline:  (1 of 1) K13458 - disease resistance protein (RAR1) Genomic Order:  1172
Name:  ? Carub.0008s1172 Secondary Identifier:  ? PAC:39250231

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1172 0.5kb upstream 0.5kb upstream 1540 true scaffold_8: 6968638-6970177 Capsella rubella
Carub.0008s1172 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6969678-6970177 Capsella rubella
Carub.0008s1172 0.5kb downstream 0.5kb downstream 1540 true scaffold_8: 6968138-6969677 Capsella rubella
Carub.0008s1172 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6968138-6968637 Capsella rubella
Carub.0008s1172 1.0kb upstream 1.0kb upstream 2040 true scaffold_8: 6968638-6970677 Capsella rubella
Carub.0008s1172 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6969678-6970677 Capsella rubella
Carub.0008s1172 1.0kb downstream 1.0kb downstream 2040 true scaffold_8: 6967638-6969677 Capsella rubella
Carub.0008s1172 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6967638-6968637 Capsella rubella
Carub.0008s1172 2.0kb upstream 2.0kb upstream 3040 true scaffold_8: 6968638-6971677 Capsella rubella
Carub.0008s1172 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6969678-6971677 Capsella rubella
Carub.0008s1172 2.0kb downstream 2.0kb downstream 3040 true scaffold_8: 6966638-6969677 Capsella rubella
Carub.0008s1172 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6966638-6968637 Capsella rubella
Carub.0008s1172 5.0kb upstream 5.0kb upstream 6040 true scaffold_8: 6968638-6974677 Capsella rubella
Carub.0008s1172 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6969678-6974677 Capsella rubella
Carub.0008s1172 5.0kb downstream 5.0kb downstream 6040 true scaffold_8: 6963638-6969677 Capsella rubella
Carub.0008s1172 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6963638-6968637 Capsella rubella
Carub.0008s1172 10.0kb upstream 10.0kb upstream 11040 true scaffold_8: 6968638-6979677 Capsella rubella
Carub.0008s1172 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6969678-6979677 Capsella rubella
Carub.0008s1172 10.0kb downstream 10.0kb downstream 11040 true scaffold_8: 6958638-6969677 Capsella rubella
Carub.0008s1172 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6958638-6968637 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377185 5261 Brassicaceae View MSA
123829414 5264 Brassicales-Malvales View MSA
124344930 5266 SBM View MSA
124242579 5268 Malvidae View MSA
124062885 5270 Rosid View MSA
123738492 5271 Pentapetalae View MSA
122790880 5272 Eudicot View MSA
122044060 5273 Angiosperm View MSA
121346459 5274 Embryophyte View MSA
123425160 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain