Gene : Carub.0008s1185 C. rubella v1.1
Defline:  (1 of 1) PTHR10584//PTHR10584:SF192 - SUGAR KINASE // FRUCTOKINASE 1 Genomic Order:  1185
Name:  ? Carub.0008s1185 Secondary Identifier:  ? PAC:39250654
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-3801 Capsella rubella pathologic  
Crubella PWY-4101 Capsella rubella pathologic  
Crubella PWY-621 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1185 0.5kb upstream 0.5kb upstream 2675 true scaffold_8: 7039228-7041902 Capsella rubella
Carub.0008s1185 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 7039228-7039727 Capsella rubella
Carub.0008s1185 0.5kb downstream 0.5kb downstream 2675 true scaffold_8: 7039728-7042402 Capsella rubella
Carub.0008s1185 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 7041903-7042402 Capsella rubella
Carub.0008s1185 1.0kb upstream 1.0kb upstream 3175 true scaffold_8: 7038728-7041902 Capsella rubella
Carub.0008s1185 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 7038728-7039727 Capsella rubella
Carub.0008s1185 1.0kb downstream 1.0kb downstream 3175 true scaffold_8: 7039728-7042902 Capsella rubella
Carub.0008s1185 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 7041903-7042902 Capsella rubella
Carub.0008s1185 2.0kb upstream 2.0kb upstream 4175 true scaffold_8: 7037728-7041902 Capsella rubella
Carub.0008s1185 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 7037728-7039727 Capsella rubella
Carub.0008s1185 2.0kb downstream 2.0kb downstream 4175 true scaffold_8: 7039728-7043902 Capsella rubella
Carub.0008s1185 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 7041903-7043902 Capsella rubella
Carub.0008s1185 5.0kb upstream 5.0kb upstream 7175 true scaffold_8: 7034728-7041902 Capsella rubella
Carub.0008s1185 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 7034728-7039727 Capsella rubella
Carub.0008s1185 5.0kb downstream 5.0kb downstream 7175 true scaffold_8: 7039728-7046902 Capsella rubella
Carub.0008s1185 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 7041903-7046902 Capsella rubella
Carub.0008s1185 10.0kb upstream 10.0kb upstream 12175 true scaffold_8: 7029728-7041902 Capsella rubella
Carub.0008s1185 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 7029728-7039727 Capsella rubella
Carub.0008s1185 10.0kb downstream 10.0kb downstream 12175 true scaffold_8: 7039728-7051902 Capsella rubella
Carub.0008s1185 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 7041903-7051902 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367299 5261 Brassicaceae View MSA
123840927 5264 Brassicales-Malvales View MSA
124336568 5266 SBM View MSA
124254064 5268 Malvidae View MSA
124069533 5270 Rosid View MSA
123742774 5271 Pentapetalae View MSA
122790590 5272 Eudicot View MSA
122045850 5273 Angiosperm View MSA
121350713 5274 Embryophyte View MSA
123424695 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain