Gene : Carub.0008s1264 C. rubella v1.1
Defline:  (1 of 1) PTHR11451//PTHR11451:SF6 - TRNA SYNTHETASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1264
Name:  ? Carub.0008s1264 Secondary Identifier:  ? PAC:39250900
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella TRNA-CHARGING-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1264 0.5kb upstream 0.5kb upstream 3516 true scaffold_8: 7364230-7367745 Capsella rubella
Carub.0008s1264 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 7364230-7364729 Capsella rubella
Carub.0008s1264 0.5kb downstream 0.5kb downstream 3516 true scaffold_8: 7364730-7368245 Capsella rubella
Carub.0008s1264 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 7367746-7368245 Capsella rubella
Carub.0008s1264 1.0kb upstream 1.0kb upstream 4016 true scaffold_8: 7363730-7367745 Capsella rubella
Carub.0008s1264 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 7363730-7364729 Capsella rubella
Carub.0008s1264 1.0kb downstream 1.0kb downstream 4016 true scaffold_8: 7364730-7368745 Capsella rubella
Carub.0008s1264 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 7367746-7368745 Capsella rubella
Carub.0008s1264 2.0kb upstream 2.0kb upstream 5016 true scaffold_8: 7362730-7367745 Capsella rubella
Carub.0008s1264 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 7362730-7364729 Capsella rubella
Carub.0008s1264 2.0kb downstream 2.0kb downstream 5016 true scaffold_8: 7364730-7369745 Capsella rubella
Carub.0008s1264 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 7367746-7369745 Capsella rubella
Carub.0008s1264 5.0kb upstream 5.0kb upstream 8016 true scaffold_8: 7359730-7367745 Capsella rubella
Carub.0008s1264 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 7359730-7364729 Capsella rubella
Carub.0008s1264 5.0kb downstream 5.0kb downstream 8016 true scaffold_8: 7364730-7372745 Capsella rubella
Carub.0008s1264 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 7367746-7372745 Capsella rubella
Carub.0008s1264 10.0kb upstream 10.0kb upstream 13016 true scaffold_8: 7354730-7367745 Capsella rubella
Carub.0008s1264 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 7354730-7364729 Capsella rubella
Carub.0008s1264 10.0kb downstream 10.0kb downstream 13016 true scaffold_8: 7364730-7377745 Capsella rubella
Carub.0008s1264 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 7367746-7377745 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367918 5261 Brassicaceae View MSA
123834383 5264 Brassicales-Malvales View MSA
124344312 5266 SBM View MSA
124238482 5268 Malvidae View MSA
124067863 5270 Rosid View MSA
123737640 5271 Pentapetalae View MSA
122793581 5272 Eudicot View MSA
122044069 5273 Angiosperm View MSA
121345199 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain