Gene : Carub.0008s1072 C. rubella v1.1
Defline:  (1 of 1) PTHR12300//PTHR12300:SF58 - HVA22-LIKE PROTEINS // SUBFAMILY NOT NAMED Genomic Order:  1072
Name:  ? Carub.0008s1072 Secondary Identifier:  ? PAC:39253124
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1072 0.5kb upstream 0.5kb upstream 1766 true scaffold_8: 6549326-6551091 Capsella rubella
Carub.0008s1072 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6550592-6551091 Capsella rubella
Carub.0008s1072 0.5kb downstream 0.5kb downstream 1766 true scaffold_8: 6548826-6550591 Capsella rubella
Carub.0008s1072 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6548826-6549325 Capsella rubella
Carub.0008s1072 1.0kb upstream 1.0kb upstream 2266 true scaffold_8: 6549326-6551591 Capsella rubella
Carub.0008s1072 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6550592-6551591 Capsella rubella
Carub.0008s1072 1.0kb downstream 1.0kb downstream 2266 true scaffold_8: 6548326-6550591 Capsella rubella
Carub.0008s1072 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6548326-6549325 Capsella rubella
Carub.0008s1072 2.0kb upstream 2.0kb upstream 3266 true scaffold_8: 6549326-6552591 Capsella rubella
Carub.0008s1072 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6550592-6552591 Capsella rubella
Carub.0008s1072 2.0kb downstream 2.0kb downstream 3266 true scaffold_8: 6547326-6550591 Capsella rubella
Carub.0008s1072 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6547326-6549325 Capsella rubella
Carub.0008s1072 5.0kb upstream 5.0kb upstream 6266 true scaffold_8: 6549326-6555591 Capsella rubella
Carub.0008s1072 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6550592-6555591 Capsella rubella
Carub.0008s1072 5.0kb downstream 5.0kb downstream 6266 true scaffold_8: 6544326-6550591 Capsella rubella
Carub.0008s1072 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6544326-6549325 Capsella rubella
Carub.0008s1072 10.0kb upstream 10.0kb upstream 11266 true scaffold_8: 6549326-6560591 Capsella rubella
Carub.0008s1072 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6550592-6560591 Capsella rubella
Carub.0008s1072 10.0kb downstream 10.0kb downstream 11266 true scaffold_8: 6539326-6550591 Capsella rubella
Carub.0008s1072 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6539326-6549325 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374748 5261 Brassicaceae View MSA
123830573 5264 Brassicales-Malvales View MSA
124341448 5266 SBM View MSA
124248122 5268 Malvidae View MSA
124062938 5270 Rosid View MSA
123747497 5271 Pentapetalae View MSA
122794612 5272 Eudicot View MSA
122049450 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain