Gene : Carub.0008s0835 C. rubella v1.1
Defline:  (1 of 2) PTHR33159//PTHR33159:SF6 - FAMILY NOT NAMED // RPM1-INTERACTING PROTEIN 4 Genomic Order:  835
Name:  ? Carub.0008s0835 Secondary Identifier:  ? PAC:39250406
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0835 0.5kb upstream 0.5kb upstream 2001 true scaffold_8: 5508541-5510541 Capsella rubella
Carub.0008s0835 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 5510042-5510541 Capsella rubella
Carub.0008s0835 0.5kb downstream 0.5kb downstream 2001 true scaffold_8: 5508041-5510041 Capsella rubella
Carub.0008s0835 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 5508041-5508540 Capsella rubella
Carub.0008s0835 1.0kb upstream 1.0kb upstream 2501 true scaffold_8: 5508541-5511041 Capsella rubella
Carub.0008s0835 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 5510042-5511041 Capsella rubella
Carub.0008s0835 1.0kb downstream 1.0kb downstream 2501 true scaffold_8: 5507541-5510041 Capsella rubella
Carub.0008s0835 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 5507541-5508540 Capsella rubella
Carub.0008s0835 2.0kb upstream 2.0kb upstream 3501 true scaffold_8: 5508541-5512041 Capsella rubella
Carub.0008s0835 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 5510042-5512041 Capsella rubella
Carub.0008s0835 2.0kb downstream 2.0kb downstream 3501 true scaffold_8: 5506541-5510041 Capsella rubella
Carub.0008s0835 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 5506541-5508540 Capsella rubella
Carub.0008s0835 5.0kb upstream 5.0kb upstream 6501 true scaffold_8: 5508541-5515041 Capsella rubella
Carub.0008s0835 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 5510042-5515041 Capsella rubella
Carub.0008s0835 5.0kb downstream 5.0kb downstream 6501 true scaffold_8: 5503541-5510041 Capsella rubella
Carub.0008s0835 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 5503541-5508540 Capsella rubella
Carub.0008s0835 10.0kb upstream 10.0kb upstream 11501 true scaffold_8: 5508541-5520041 Capsella rubella
Carub.0008s0835 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 5510042-5520041 Capsella rubella
Carub.0008s0835 10.0kb downstream 10.0kb downstream 11501 true scaffold_8: 5498541-5510041 Capsella rubella
Carub.0008s0835 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 5498541-5508540 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366953 5261 Brassicaceae View MSA
123799269 5264 Brassicales-Malvales View MSA
124351148 5266 SBM View MSA
124250408 5268 Malvidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain