Gene : Carub.0008s0847 C. rubella v1.1
Defline:  (1 of 1) PTHR33385//PTHR33385:SF4 - FAMILY NOT NAMED // PROTEIN XRI1 Genomic Order:  847
Name:  ? Carub.0008s0847 Secondary Identifier:  ? PAC:39252920
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0847 0.5kb upstream 0.5kb upstream 4017 true scaffold_8: 5572424-5576440 Capsella rubella
Carub.0008s0847 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 5572424-5572923 Capsella rubella
Carub.0008s0847 0.5kb downstream 0.5kb downstream 4017 true scaffold_8: 5572924-5576940 Capsella rubella
Carub.0008s0847 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 5576441-5576940 Capsella rubella
Carub.0008s0847 1.0kb upstream 1.0kb upstream 4517 true scaffold_8: 5571924-5576440 Capsella rubella
Carub.0008s0847 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 5571924-5572923 Capsella rubella
Carub.0008s0847 1.0kb downstream 1.0kb downstream 4517 true scaffold_8: 5572924-5577440 Capsella rubella
Carub.0008s0847 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 5576441-5577440 Capsella rubella
Carub.0008s0847 2.0kb upstream 2.0kb upstream 5517 true scaffold_8: 5570924-5576440 Capsella rubella
Carub.0008s0847 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 5570924-5572923 Capsella rubella
Carub.0008s0847 2.0kb downstream 2.0kb downstream 5517 true scaffold_8: 5572924-5578440 Capsella rubella
Carub.0008s0847 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 5576441-5578440 Capsella rubella
Carub.0008s0847 5.0kb upstream 5.0kb upstream 8517 true scaffold_8: 5567924-5576440 Capsella rubella
Carub.0008s0847 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 5567924-5572923 Capsella rubella
Carub.0008s0847 5.0kb downstream 5.0kb downstream 8517 true scaffold_8: 5572924-5581440 Capsella rubella
Carub.0008s0847 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 5576441-5581440 Capsella rubella
Carub.0008s0847 10.0kb upstream 10.0kb upstream 13517 true scaffold_8: 5562924-5576440 Capsella rubella
Carub.0008s0847 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 5562924-5572923 Capsella rubella
Carub.0008s0847 10.0kb downstream 10.0kb downstream 13517 true scaffold_8: 5572924-5586440 Capsella rubella
Carub.0008s0847 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 5576441-5586440 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373726 5261 Brassicaceae View MSA
123840532 5264 Brassicales-Malvales View MSA
124350194 5266 SBM View MSA
124243152 5268 Malvidae View MSA
124050425 5270 Rosid View MSA
123749670 5271 Pentapetalae View MSA
122786653 5272 Eudicot View MSA
122050817 5273 Angiosperm View MSA
121348278 5274 Embryophyte View MSA
123380804 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain