Gene : Carub.0008s0853 C. rubella v1.1
Defline:  (1 of 33) PF03000 - NPH3 family (NPH3) Genomic Order:  853
Name:  ? Carub.0008s0853 Secondary Identifier:  ? PAC:39252067
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0853 0.5kb upstream 0.5kb upstream 2419 true scaffold_8: 5602369-5604787 Capsella rubella
Carub.0008s0853 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 5602369-5602868 Capsella rubella
Carub.0008s0853 0.5kb downstream 0.5kb downstream 2419 true scaffold_8: 5602869-5605287 Capsella rubella
Carub.0008s0853 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 5604788-5605287 Capsella rubella
Carub.0008s0853 1.0kb upstream 1.0kb upstream 2919 true scaffold_8: 5601869-5604787 Capsella rubella
Carub.0008s0853 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 5601869-5602868 Capsella rubella
Carub.0008s0853 1.0kb downstream 1.0kb downstream 2919 true scaffold_8: 5602869-5605787 Capsella rubella
Carub.0008s0853 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 5604788-5605787 Capsella rubella
Carub.0008s0853 2.0kb upstream 2.0kb upstream 3919 true scaffold_8: 5600869-5604787 Capsella rubella
Carub.0008s0853 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 5600869-5602868 Capsella rubella
Carub.0008s0853 2.0kb downstream 2.0kb downstream 3919 true scaffold_8: 5602869-5606787 Capsella rubella
Carub.0008s0853 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 5604788-5606787 Capsella rubella
Carub.0008s0853 5.0kb upstream 5.0kb upstream 6919 true scaffold_8: 5597869-5604787 Capsella rubella
Carub.0008s0853 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 5597869-5602868 Capsella rubella
Carub.0008s0853 5.0kb downstream 5.0kb downstream 6919 true scaffold_8: 5602869-5609787 Capsella rubella
Carub.0008s0853 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 5604788-5609787 Capsella rubella
Carub.0008s0853 10.0kb upstream 10.0kb upstream 11919 true scaffold_8: 5592869-5604787 Capsella rubella
Carub.0008s0853 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 5592869-5602868 Capsella rubella
Carub.0008s0853 10.0kb downstream 10.0kb downstream 11919 true scaffold_8: 5602869-5614787 Capsella rubella
Carub.0008s0853 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 5604788-5614787 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337157 5261 Brassicaceae Singleton cluster - no MSA
123841468 5264 Brassicales-Malvales View MSA
124343033 5266 SBM View MSA
124240767 5268 Malvidae View MSA
124065834 5270 Rosid View MSA
123743822 5271 Pentapetalae View MSA
122789563 5272 Eudicot View MSA
122044004 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain