Gene : Carub.0008s0871 C. rubella v1.1
Defline:  (1 of 1) PTHR12103//PTHR12103:SF15 - CYTOSOLIC PURINE 5-NUCLEOTIDASE-RELATED // PROTEIN Y71H10B.1, ISOFORM C Genomic Order:  871
Name:  ? Carub.0008s0871 Secondary Identifier:  ? PAC:39252779
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5381 Capsella rubella pathologic  
Crubella PWY-5695 Capsella rubella pathologic  
Crubella PWY-6596 Capsella rubella pathologic  
Crubella PWY-6606 Capsella rubella pathologic  
Crubella PWY-6608 Capsella rubella pathologic  
Crubella PWY-7185 Capsella rubella pathologic  
Crubella SALVADEHYPOX-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0871 0.5kb upstream 0.5kb upstream 4615 true scaffold_8: 5682095-5686709 Capsella rubella
Carub.0008s0871 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 5682095-5682594 Capsella rubella
Carub.0008s0871 0.5kb downstream 0.5kb downstream 4615 true scaffold_8: 5682595-5687209 Capsella rubella
Carub.0008s0871 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 5686710-5687209 Capsella rubella
Carub.0008s0871 1.0kb upstream 1.0kb upstream 5115 true scaffold_8: 5681595-5686709 Capsella rubella
Carub.0008s0871 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 5681595-5682594 Capsella rubella
Carub.0008s0871 1.0kb downstream 1.0kb downstream 5115 true scaffold_8: 5682595-5687709 Capsella rubella
Carub.0008s0871 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 5686710-5687709 Capsella rubella
Carub.0008s0871 2.0kb upstream 2.0kb upstream 6115 true scaffold_8: 5680595-5686709 Capsella rubella
Carub.0008s0871 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 5680595-5682594 Capsella rubella
Carub.0008s0871 2.0kb downstream 2.0kb downstream 6115 true scaffold_8: 5682595-5688709 Capsella rubella
Carub.0008s0871 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 5686710-5688709 Capsella rubella
Carub.0008s0871 5.0kb upstream 5.0kb upstream 9115 true scaffold_8: 5677595-5686709 Capsella rubella
Carub.0008s0871 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 5677595-5682594 Capsella rubella
Carub.0008s0871 5.0kb downstream 5.0kb downstream 9115 true scaffold_8: 5682595-5691709 Capsella rubella
Carub.0008s0871 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 5686710-5691709 Capsella rubella
Carub.0008s0871 10.0kb upstream 10.0kb upstream 14115 true scaffold_8: 5672595-5686709 Capsella rubella
Carub.0008s0871 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 5672595-5682594 Capsella rubella
Carub.0008s0871 10.0kb downstream 10.0kb downstream 14115 true scaffold_8: 5682595-5696709 Capsella rubella
Carub.0008s0871 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 5686710-5696709 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372227 5261 Brassicaceae View MSA
123831857 5264 Brassicales-Malvales View MSA
124339151 5266 SBM View MSA
124240270 5268 Malvidae View MSA
124068211 5270 Rosid View MSA
123737665 5271 Pentapetalae View MSA
122791643 5272 Eudicot View MSA
122047962 5273 Angiosperm View MSA
121348672 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain