Gene : Carub.0008s1191 C. rubella v1.1
Defline:  (1 of 4) PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 Genomic Order:  1191
Name:  ? Carub.0008s1191 Secondary Identifier:  ? PAC:39251077
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s1191 0.5kb upstream 0.5kb upstream 2614 true scaffold_8: 7059943-7062556 Capsella rubella
Carub.0008s1191 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 7062057-7062556 Capsella rubella
Carub.0008s1191 0.5kb downstream 0.5kb downstream 2614 true scaffold_8: 7059443-7062056 Capsella rubella
Carub.0008s1191 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 7059443-7059942 Capsella rubella
Carub.0008s1191 1.0kb upstream 1.0kb upstream 3114 true scaffold_8: 7059943-7063056 Capsella rubella
Carub.0008s1191 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 7062057-7063056 Capsella rubella
Carub.0008s1191 1.0kb downstream 1.0kb downstream 3114 true scaffold_8: 7058943-7062056 Capsella rubella
Carub.0008s1191 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 7058943-7059942 Capsella rubella
Carub.0008s1191 2.0kb upstream 2.0kb upstream 4114 true scaffold_8: 7059943-7064056 Capsella rubella
Carub.0008s1191 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 7062057-7064056 Capsella rubella
Carub.0008s1191 2.0kb downstream 2.0kb downstream 4114 true scaffold_8: 7057943-7062056 Capsella rubella
Carub.0008s1191 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 7057943-7059942 Capsella rubella
Carub.0008s1191 5.0kb upstream 5.0kb upstream 7114 true scaffold_8: 7059943-7067056 Capsella rubella
Carub.0008s1191 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 7062057-7067056 Capsella rubella
Carub.0008s1191 5.0kb downstream 5.0kb downstream 7114 true scaffold_8: 7054943-7062056 Capsella rubella
Carub.0008s1191 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 7054943-7059942 Capsella rubella
Carub.0008s1191 10.0kb upstream 10.0kb upstream 12114 true scaffold_8: 7059943-7072056 Capsella rubella
Carub.0008s1191 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 7062057-7072056 Capsella rubella
Carub.0008s1191 10.0kb downstream 10.0kb downstream 12114 true scaffold_8: 7049943-7062056 Capsella rubella
Carub.0008s1191 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 7049943-7059942 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377526 5261 Brassicaceae View MSA
123801556 5264 Brassicales-Malvales View MSA
124298845 5266 SBM View MSA
124150395 5268 Malvidae View MSA
124073798 5270 Rosid View MSA
123750432 5271 Pentapetalae View MSA
122795311 5272 Eudicot View MSA
122042392 5273 Angiosperm View MSA
121309956 5274 Embryophyte View MSA
123347576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain