Gene : Carub.0008s0439 C. rubella v1.1
Defline:  (1 of 3) PTHR32077//PTHR32077:SF6 - FAMILY NOT NAMED // FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13-RELATED Genomic Order:  439
Name:  ? Carub.0008s0439 Secondary Identifier:  ? PAC:39250142
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0439 0.5kb upstream 0.5kb upstream 1429 true scaffold_8: 1859046-1860474 Capsella rubella
Carub.0008s0439 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1859975-1860474 Capsella rubella
Carub.0008s0439 0.5kb downstream 0.5kb downstream 1429 true scaffold_8: 1858546-1859974 Capsella rubella
Carub.0008s0439 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1858546-1859045 Capsella rubella
Carub.0008s0439 1.0kb upstream 1.0kb upstream 1929 true scaffold_8: 1859046-1860974 Capsella rubella
Carub.0008s0439 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1859975-1860974 Capsella rubella
Carub.0008s0439 1.0kb downstream 1.0kb downstream 1929 true scaffold_8: 1858046-1859974 Capsella rubella
Carub.0008s0439 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1858046-1859045 Capsella rubella
Carub.0008s0439 2.0kb upstream 2.0kb upstream 2929 true scaffold_8: 1859046-1861974 Capsella rubella
Carub.0008s0439 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1859975-1861974 Capsella rubella
Carub.0008s0439 2.0kb downstream 2.0kb downstream 2929 true scaffold_8: 1857046-1859974 Capsella rubella
Carub.0008s0439 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1857046-1859045 Capsella rubella
Carub.0008s0439 5.0kb upstream 5.0kb upstream 5929 true scaffold_8: 1859046-1864974 Capsella rubella
Carub.0008s0439 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1859975-1864974 Capsella rubella
Carub.0008s0439 5.0kb downstream 5.0kb downstream 5929 true scaffold_8: 1854046-1859974 Capsella rubella
Carub.0008s0439 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1854046-1859045 Capsella rubella
Carub.0008s0439 10.0kb upstream 10.0kb upstream 10929 true scaffold_8: 1859046-1869974 Capsella rubella
Carub.0008s0439 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1859975-1869974 Capsella rubella
Carub.0008s0439 10.0kb downstream 10.0kb downstream 10929 true scaffold_8: 1849046-1859974 Capsella rubella
Carub.0008s0439 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1849046-1859045 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365063 5261 Brassicaceae View MSA
123798885 5264 Brassicales-Malvales View MSA
124349082 5266 SBM View MSA
124252572 5268 Malvidae View MSA
124064372 5270 Rosid View MSA
123738115 5271 Pentapetalae View MSA
122787076 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain