Gene : Carub.0006s0855 C. rubella v1.1
Defline:  (1 of 2) PTHR22904//PTHR22904:SF358 - TPR REPEAT CONTAINING PROTEIN // CC-TETRATRICOPEPTIDE REPEAT PROTEIN Genomic Order:  855
Name:  ? Carub.0006s0855 Secondary Identifier:  ? PAC:39249898
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0855 0.5kb upstream 0.5kb upstream 2510 true scaffold_6: 3097980-3100489 Capsella rubella
Carub.0006s0855 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3099990-3100489 Capsella rubella
Carub.0006s0855 0.5kb downstream 0.5kb downstream 2510 true scaffold_6: 3097480-3099989 Capsella rubella
Carub.0006s0855 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3097480-3097979 Capsella rubella
Carub.0006s0855 1.0kb upstream 1.0kb upstream 3010 true scaffold_6: 3097980-3100989 Capsella rubella
Carub.0006s0855 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3099990-3100989 Capsella rubella
Carub.0006s0855 1.0kb downstream 1.0kb downstream 3010 true scaffold_6: 3096980-3099989 Capsella rubella
Carub.0006s0855 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3096980-3097979 Capsella rubella
Carub.0006s0855 2.0kb upstream 2.0kb upstream 4010 true scaffold_6: 3097980-3101989 Capsella rubella
Carub.0006s0855 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3099990-3101989 Capsella rubella
Carub.0006s0855 2.0kb downstream 2.0kb downstream 4010 true scaffold_6: 3095980-3099989 Capsella rubella
Carub.0006s0855 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3095980-3097979 Capsella rubella
Carub.0006s0855 5.0kb upstream 5.0kb upstream 7010 true scaffold_6: 3097980-3104989 Capsella rubella
Carub.0006s0855 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3099990-3104989 Capsella rubella
Carub.0006s0855 5.0kb downstream 5.0kb downstream 7010 true scaffold_6: 3092980-3099989 Capsella rubella
Carub.0006s0855 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3092980-3097979 Capsella rubella
Carub.0006s0855 10.0kb upstream 10.0kb upstream 12010 true scaffold_6: 3097980-3109989 Capsella rubella
Carub.0006s0855 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3099990-3109989 Capsella rubella
Carub.0006s0855 10.0kb downstream 10.0kb downstream 12010 true scaffold_6: 3087980-3099989 Capsella rubella
Carub.0006s0855 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3087980-3097979 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365612 5261 Brassicaceae View MSA
123838346 5264 Brassicales-Malvales View MSA
124343835 5266 SBM View MSA
124254049 5268 Malvidae View MSA
124063288 5270 Rosid View MSA
123737789 5271 Pentapetalae View MSA
122790297 5272 Eudicot View MSA
122047040 5273 Angiosperm View MSA
121310683 5274 Embryophyte View MSA
123348108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain