Gene : Carub.0008s0640 C. rubella v1.1
Defline:  (1 of 2) PTHR31496:SF7 - TRANSCRIPTION REPRESSOR KAN1-RELATED Genomic Order:  640
Name:  ? Carub.0008s0640 Secondary Identifier:  ? PAC:39251607
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0640 0.5kb upstream 0.5kb upstream 2549 true scaffold_8: 3007758-3010306 Capsella rubella
Carub.0008s0640 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3007758-3008257 Capsella rubella
Carub.0008s0640 0.5kb downstream 0.5kb downstream 2549 true scaffold_8: 3008258-3010806 Capsella rubella
Carub.0008s0640 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3010307-3010806 Capsella rubella
Carub.0008s0640 1.0kb upstream 1.0kb upstream 3049 true scaffold_8: 3007258-3010306 Capsella rubella
Carub.0008s0640 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3007258-3008257 Capsella rubella
Carub.0008s0640 1.0kb downstream 1.0kb downstream 3049 true scaffold_8: 3008258-3011306 Capsella rubella
Carub.0008s0640 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3010307-3011306 Capsella rubella
Carub.0008s0640 2.0kb upstream 2.0kb upstream 4049 true scaffold_8: 3006258-3010306 Capsella rubella
Carub.0008s0640 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3006258-3008257 Capsella rubella
Carub.0008s0640 2.0kb downstream 2.0kb downstream 4049 true scaffold_8: 3008258-3012306 Capsella rubella
Carub.0008s0640 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3010307-3012306 Capsella rubella
Carub.0008s0640 5.0kb upstream 5.0kb upstream 7049 true scaffold_8: 3003258-3010306 Capsella rubella
Carub.0008s0640 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3003258-3008257 Capsella rubella
Carub.0008s0640 5.0kb downstream 5.0kb downstream 7049 true scaffold_8: 3008258-3015306 Capsella rubella
Carub.0008s0640 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3010307-3015306 Capsella rubella
Carub.0008s0640 10.0kb upstream 10.0kb upstream 12049 true scaffold_8: 2998258-3010306 Capsella rubella
Carub.0008s0640 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2998258-3008257 Capsella rubella
Carub.0008s0640 10.0kb downstream 10.0kb downstream 12049 true scaffold_8: 3008258-3020306 Capsella rubella
Carub.0008s0640 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3010307-3020306 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364995 5261 Brassicaceae View MSA
123836060 5264 Brassicales-Malvales View MSA
124343046 5266 SBM View MSA
124238676 5268 Malvidae View MSA
124063022 5270 Rosid View MSA
123741195 5271 Pentapetalae View MSA
122791849 5272 Eudicot View MSA
122046873 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349698 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain